Parental gene:

UBE2E3, ENSG00000170035

Aliases:UBE2E3, UBCH9, UbcM2
Description:ubiquitin-conjugating enzyme E2E 3 [Source:HGNC Symbol;Acc:12479]
Organism:Human (Homo sapiens)
Coordinates:2:181831974..181941312(+)


>ENSG00000170035
ATGTCCAGTGATAGGCAAAGGTCCGATGATGAGAGCCCCAGCACCAGCAGTGGCAGTTCAGATGCGGACCAGCGAGACCC
AGCCGCTCCAGAGCCTGAAGAACAAGAGGAAAGAAAACCTTCTGCCACCCAGCAGAAGAAAAACACCAAACTCTCTAGCA
AAACCACTGCTAAGTTATCCACTAGTGCTAAAAGAATTCAGAAGGAGCTAGCTGAAATAACCCTTGATCCTCCTCCTAAT
TGCAGTGCTGGGCCTAAAGGAGATAACATTTATGAATGGAGATCAACTATACTTGGTCCACCGGGTTCTGTATATGAAGG
TGGTGTGTTTTTTCTGGATATCACATTTTCATCAGATTATCCATTTAAGCCACCAAAGGTTACTTTCCGCACCAGAATCT
ATCACTGCAACATCAACAGTCAGGGAGTCATCTGTCTGGACATCCTTAAAGACAACTGGAGTCCCGCTTTGACTATTTCA
AAGGTTTTGCTGTCTATTTGTTCCCTTTTGACAGACTGCAACCCTGCGGATCCTCTGGTTGGAAGCATAGCCACTCAGTA
TTTGACCAACAGAGCAGAACACGACAGGATAGCCAGACAGTGGACCAAGAGATACGCAACATAA

Library Parental gene expression (RPM)
bodymap2_liver 24 .21 RPM
bodymap2_lung 36 .39 RPM
bodymap2_breast 52 .96 RPM
bodymap2_adipose 45 .32 RPM
bodymap2_adrenal 34 .72 RPM
bodymap2_skeletal_muscle 46 .54 RPM
bodymap2_thyroid 68 .51 RPM
bodymap2_prostate 49 .81 RPM
bodymap2_colon 42 .33 RPM
bodymap2_testis 81 .29 RPM
bodymap2_brain 61 .86 RPM
bodymap2_heart 30 .79 RPM
bodymap2_white_blood_cells 42 .13 RPM
bodymap2_lymph_node 31 .08 RPM
bodymap2_ovary 43 .87 RPM
bodymap2_kidney 58 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014163 ortholog_one2one 3 retrogenes
retro_cfam_2076, retro_cfam_2161, retro_cfam_27,
Choloepus hoffmanni ENSCHOG00000007325 ortholog_one2one 3 retrogenes
retro_chof_1756, retro_chof_2077, retro_chof_2358,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Callithrix jacchus ENSCJAG00000011559 possible_ortholog 3 retrogenes
retro_cjac_3194, retro_cjac_3911, retro_cjac_3967,
Equus caballus ENSECAG00000007233 ortholog_one2one 1 retrogene
retro_ecab_196,
Echinops telfairi ENSETEG00000019324 ortholog_one2one 2 retrogenes
retro_etel_314, retro_etel_848,
Homo sapiens ENSG00000072401 other_paralog 2 retrogenes
retro_hsap_4723, retro_hsap_4725,
Homo sapiens ENSG00000078967 other_paralog 2 retrogenes
retro_hsap_452, retro_hsap_453,
Homo sapiens ENSG00000185651 other_paralog 4 retrogenes
retro_hsap_1094, retro_hsap_1185, retro_hsap_1338, retro_hsap_1960,
Macaca mulatta ENSMMUG00000008069 ortholog_one2one 2 retrogenes
retro_mmul_1382, retro_mmul_1834,
Monodelphis domestica ENSMODG00000010301 ortholog_one2one 2 retrogenes
retro_mdom_1679, retro_mdom_1688,
Mus musculus ENSMUSG00000027011 ortholog_one2one 4 retrogenes
retro_mmus_2814, retro_mmus_3123, retro_mmus_3416, retro_mmus_3571,
Nomascus leucogenys ENSNLEG00000006290 ortholog_one2one 1 retrogene
retro_nleu_2068,
Otolemur garnettii ENSOGAG00000014956 ortholog_one2one 4 retrogenes
retro_ogar_1343, retro_ogar_2512, retro_ogar_2682, retro_ogar_3443,
Rattus norvegicus ENSRNOG00000004544 ortholog_one2one 1 retrogene
retro_rnor_1236,
Tupaia belangeri ENSTBEG00000009932 ortholog_one2one 2 retrogenes
retro_tbel_1986, retro_tbel_3294,
Tarsius syrichta ENSTSYG00000002281 ortholog_one2one 5 retrogenes
retro_tsyr_1393, retro_tsyr_1809, retro_tsyr_1842, retro_tsyr_1942, retro_tsyr_457,
Tursiops truncatus ENSTTRG00000001361 ortholog_one2one 1 retrogene
retro_ttru_1056,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4653 96.14 100.00
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Download FASTA sequences of all ENSG00000170035 retrocopies