Parental gene:

TMED10, ENSG00000170348

Aliases:TMED10, P24(DELTA), S31I125, S31III125, TMP21, Tmp-21-I, p23
Description:transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998]
Organism:Human (Homo sapiens)
Coordinates:14:75598172..75643334(-)


>ENSG00000170348
ATGTCTGGTTTGTCTGGCCCACCAGCCCGGCGCGGCCCTTTTCCGTTAGCGTTGCTGCTTTTGTTCCTGCTCGGCCCCAG
ATTGGTCCTTGCCATCTCCTTCCATCTGCCCATTAACTCTCGCAAGTGCCTCCGTGAGGAGATTCACAAGGACCTGCTAG
TGACTGGCGCGTACGAGATCTCCGACCAGTCTGGGGGCGCTGGCGGCCTGCGCAGCCACCTCAAGATCACAGATTCTGCT
GGCCATATTCTCTACTCCAAAGAGGATGCAACCAAGGGGAAATTTGCCTTTACCACTGAAGATTATGACATGTTTGAAGT
GTGTTTTGAGAGCAAGGGAACAGGGCGGATACCTGACCAACTCGTGATCCTAGACATGAAGCATGGAGTGGAGGCGAAAA
ATTACGAAGAGATTGCAAAAGTTGAGAAGCTCAAACCATTAGAGGTAGAGCTGCGACGCCTAGAAGACCTTTCAGAATCT
ATTGTTAATGATTTTGCCTACATGAAGAAGAGAGAAGAGGAGATGCGTGATACCAACGAGTCAACAAACACTCGGGTCCT
ATACTTCAGCATCTTTTCAATGTTCTGTCTCATTGGACTAGCTACCTGGCAGGTCTTCTACCTGCGACGCTTCTTCAAGG
CCAAGAAATTGATTGAGTAA

Library Parental gene expression (RPM)
bodymap2_liver 347 .93 RPM
bodymap2_lung 346 .41 RPM
bodymap2_breast 368 .62 RPM
bodymap2_adipose 308 .15 RPM
bodymap2_adrenal 243 .91 RPM
bodymap2_skeletal_muscle 340 .55 RPM
bodymap2_thyroid 362 .92 RPM
bodymap2_prostate 312 .13 RPM
bodymap2_colon 332 .38 RPM
bodymap2_testis 383 .34 RPM
bodymap2_brain 222 .61 RPM
bodymap2_heart 233 .79 RPM
bodymap2_white_blood_cells 338 .97 RPM
bodymap2_lymph_node 283 .75 RPM
bodymap2_ovary 502 .16 RPM
bodymap2_kidney 333 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016899 ortholog_one2one 1 retrogene
retro_acar_187,
Callithrix jacchus ENSCJAG00000020627 ortholog_one2one 2 retrogenes
retro_cjac_1409, retro_cjac_4223,
Dasypus novemcinctus ENSDNOG00000019851 ortholog_one2one 1 retrogene
retro_dnov_1225,
Echinops telfairi ENSETEG00000010607 possible_ortholog 1 retrogene
retro_etel_1798,
Gorilla gorilla ENSGGOG00000007453 ortholog_one2one 1 retrogene
retro_ggor_2696,
Myotis lucifugus ENSMLUG00000017125 ortholog_one2many 2 retrogenes
retro_mluc_2079, retro_mluc_2093,
Macaca mulatta ENSMMUG00000015168 ortholog_one2one 2 retrogenes
retro_mmul_2316, retro_mmul_885,
Mus musculus ENSMUSG00000021248 ortholog_one2one 2 retrogenes
retro_mmus_1093, retro_mmus_649,
Nomascus leucogenys ENSNLEG00000016453 ortholog_one2one 2 retrogenes
retro_nleu_2897, retro_nleu_2963,
Oryctolagus cuniculus ENSOCUG00000004669 ortholog_one2one 1 retrogene
retro_ocun_875,
Pongo abelii ENSPPYG00000029389 ortholog_one2one 1 retrogene
retro_pabe_3296,
Pan troglodytes ENSPTRG00000006552 ortholog_one2one 2 retrogenes
retro_ptro_1823, retro_ptro_2724,
Rattus norvegicus ENSRNOG00000007901 ortholog_one2one 2 retrogenes
retro_rnor_1729, retro_rnor_2031,
Ictidomys tridecemlineatus ENSSTOG00000007392 ortholog_one2one 1 retrogene
retro_itri_362,
Vicugna pacos ENSVPAG00000003089 ortholog_one2one 1 retrogene
retro_vpac_573,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2701 82.20 53.88
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2. retro_hsap_4014 86.36 100.00
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Download FASTA sequences of all ENSG00000170348 retrocopies