Parental gene:

TMED10, ENSPTRG00000006552

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:74400952..74444943(-)


>ENSPTRG00000006552
ATGTCTGGTTTGTCTGGCCCACCAGCCCGGCGCGGCCCTTTTCCGTTAGCGTTGCTGCTTTTGTTCCTGCTCGGCCCCAG
CTTGGTCCTCGCCATCTCCTTCCATCTGCCCATTAACTCTCGCAAGTGCCTCCGTGAGGAGATCCACAAGGACCTGCTAG
TGACTGGCGCGTACGAGATCTCCGACCAGTCTGGGGGCGCTGGCGGCCTGCGCAGCCACCTCAAGATCACAGATTCTGCT
GGCCATATTCTCTACTCCAAAGAGGATGCAACCAAGGGGAAATTTGCCTTTACCACTGAAGATTATGACATGTTTGAAGT
GTGTTTTGAGAGCAAGGGAACAGGGCGGATACCTGACCAACTCGTGATCCTAGACATGAAGCATGGAGTGGAGGCGAAAA
ATTACGAAGAGATTGCAAAAGTTGAGAAGCTCAAACCATTAGAGGTAGAGCTGCGACGCCTAGAAGACCTTTCAGAATCT
ATTGTTAATGATTTTGCCTACATGAAGAAGAGAGAAGAGGAGATGCGTGATACCAACGAGTCAACAAACACTCGGGTCCT
ATACTTCAGCATCTTTTCAATGTTCTGTCTCATTGGACTAGCTACCTGGCAGGTCTTCTACCTGCGACGCTTCTTCAAGG
CCAAGAAATTGATTGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 37 .16 RPM
SRP007412_cerebellum 39 .86 RPM
SRP007412_heart 55 .41 RPM
SRP007412_kidney 109 .60 RPM
SRP007412_liver 89 .89 RPM
SRP007412_testis 88 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016899 ortholog_one2one 1 retrogene
retro_acar_187,
Callithrix jacchus ENSCJAG00000020627 ortholog_one2one 2 retrogenes
retro_cjac_1409, retro_cjac_4223,
Dasypus novemcinctus ENSDNOG00000019851 ortholog_one2one 1 retrogene
retro_dnov_1225,
Echinops telfairi ENSETEG00000010607 possible_ortholog 1 retrogene
retro_etel_1798,
Homo sapiens ENSG00000170348 ortholog_one2one 2 retrogenes
retro_hsap_2701, retro_hsap_4014,
Gorilla gorilla ENSGGOG00000007453 ortholog_one2one 1 retrogene
retro_ggor_2696,
Myotis lucifugus ENSMLUG00000017125 ortholog_one2many 2 retrogenes
retro_mluc_2079, retro_mluc_2093,
Macaca mulatta ENSMMUG00000015168 ortholog_one2one 2 retrogenes
retro_mmul_2316, retro_mmul_885,
Mus musculus ENSMUSG00000021248 ortholog_one2one 2 retrogenes
retro_mmus_1093, retro_mmus_649,
Nomascus leucogenys ENSNLEG00000016453 ortholog_one2one 2 retrogenes
retro_nleu_2897, retro_nleu_2963,
Oryctolagus cuniculus ENSOCUG00000004669 ortholog_one2one 1 retrogene
retro_ocun_875,
Pongo abelii ENSPPYG00000029389 ortholog_one2one 1 retrogene
retro_pabe_3296,
Rattus norvegicus ENSRNOG00000007901 ortholog_one2one 2 retrogenes
retro_rnor_1729, retro_rnor_2031,
Ictidomys tridecemlineatus ENSSTOG00000007392 ortholog_one2one 1 retrogene
retro_itri_362,
Vicugna pacos ENSVPAG00000003089 ortholog_one2one 1 retrogene
retro_vpac_573,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1823 79.49 53.42
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_2724 85.45 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000006552 retrocopies