Parental gene:

RP11-683L23.1, ENSG00000173213

Aliases:None
Description:Tubulin beta-8 chain-like protein LOC260334 [Source:UniProtKB/Swiss-Prot;Acc:A6NNZ2]
Organism:Human (Homo sapiens)
Coordinates:18:47224..73545(-)


>ENSG00000173213
ATGAGGGAAATCGTGCTCACGCAGACCGGGCAGTGCGGGAACCAGATCGGCGCCAAGTTCTGGGAGGTGATCTCTGATGA
ACATGCCATCGACTCCGCTGGCACCTACCACGGGGACAGCCACCTGCAGCTGGAGCGCATCAACGTGCACCACCACGAGG
CCAGCGGTGGCAGGTACGTGCCCCGCGCTGTGCTCGTGGATCTGGAGCCGGGCACCATGGACTCTGTGCACTCGGGGCCC
TTCGGGCAGGTCTTCAGGCCAGACAACTTCATTTCCGGTCAGTGTGGGGCCGGAAACAACTGGGCCAAGGGACGCTACAC
AGAAGGCGCGGAGCTGACGGAGTCAGTGATGGACGTTGTCAGAAAGGAGGCTGAGAGCTGTGACTGCCTGCAGGGTTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTTCTCATTAGTAAGATCCGGGAGGAGTACCCA
GACAGGATCATAAACACATTCAGCATCCTGCCCTCGCCCAAGGTGTCGGACACCGTGGTGGAGCCCTACAACGCCACCCT
CTCAGTCCACCAGCTCATAGAAAACGCGGATGAGACCTTCTGCATAGATAACGAAGCGCTATATGACATATGTTCCAGGA
CCCTAAAACTGCCCACACCCACCTATGGTGACCTGAACCACCTGGTGTCTGCTACCATGAGTGGGGTCACCACATGCCTG
CGCTTCCCAGGCCAGCTGAATGCTGACCTGCGGAAGCTGGCCGTGAACATGGTCCCGTTTCCCCGGCTGCATTTCTTCAT
GCCCGGCTTTGCCCCACTGACCAGCCGGGGCAGCCAGCAGTACCGGGCCTTGACTGTGGCTGAGCTCACCCAGCAGATGT
TTGATGCTAAGAACATGATGGCTGCCTGTGACCCCCGTCACGGCTGCTACCTAACGGTGGCTGCCATTTTCAGGGGTCGC
ATGCCCATGAGGGAGGTGGATGAACAAATGTTCAACATTCAAGATAAGAACAGCAGCTACTTTGCTGACTGGTTCCCCGA
CAACGTAAAAACAGCCGTCTGTGACATCCCACCCCGGGGGCTAAAAATGTCAGCCACCTTCATTGGGAATAATGCGGCCA
TCCAGGAACTCTTCACATGTGTCTCAGAGCAGTTTACAGCAATGTTCAGGCGCAAGGCCTTCCTCCACTGGTACACGGGC
GAGGGCATGGATGAGATGGAATTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCTGAATATCAGCAATATCAGGA
TGCCACGGCCGAGGAGGAGGAGGATGAGGAGTATGCCGAGGAGGAGGTGGCCTAG

Library Parental gene expression (RPM)
bodymap2_liver 0 .00 RPM
bodymap2_lung 0 .00 RPM
bodymap2_breast 0 .19 RPM
bodymap2_adipose 0 .14 RPM
bodymap2_adrenal 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 0 .00 RPM
bodymap2_prostate 0 .02 RPM
bodymap2_colon 0 .00 RPM
bodymap2_testis 2 .32 RPM
bodymap2_brain 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_white_blood_cells 0 .06 RPM
bodymap2_lymph_node 0 .22 RPM
bodymap2_ovary 0 .13 RPM
bodymap2_kidney 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010101 ortholog_many2many 1 retrogene
retro_cjac_800,
Callithrix jacchus ENSCJAG00000011697 ortholog_many2many 1 retrogene
retro_cjac_3284,
Dipodomys ordii ENSDORG00000015889 ortholog_many2many 1 retrogene
retro_dord_254,
Homo sapiens ENSG00000104833 other_paralog 1 retrogene
retro_hsap_4751,
Homo sapiens ENSG00000173876 within_species_paralog 1 retrogene
retro_hsap_3944,
Homo sapiens ENSG00000258947 other_paralog 1 retrogene
retro_hsap_155,
Mus musculus ENSMUSG00000016255 possible_ortholog 1 retrogene
retro_mmus_1109,
Pongo abelii ENSPPYG00000011180 possible_ortholog 1 retrogene
retro_pabe_3250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3733 75.56 99.55
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Download FASTA sequences of all ENSG00000173213 retrocopies