Parental gene:

TUBB8, ENSG00000173876

Aliases:None
Description:tubulin, beta 8 class VIII [Source:HGNC Symbol;Acc:20773]
Organism:Human (Homo sapiens)
Coordinates:10:92827..120103(-)


>ENSG00000173876
ATGAGGGAGATCGTGCTCACGCAGATCGGGCAGTGCGGGAATCAGATCGGCGCCAAGTTCTGGGAGGTGATCTCTGATGA
ACATGCCATCGACTCCGCTGGCACCTACCACGGGGACAGCCACCTGCAGCTGGAGCGCATCAACGTGTACTACAACGAGG
CCAGCGGTGGCAGGTACGTGCCCCGCGCTGTGCTCGTGGATCTGGAGCCGGGCACCATGGACTCTGTGCGCTCGGGGCCC
TTCGGGCAGGTCTTCAGGCCAGACAACTTCATCTTCGGTCAGTGTGGGGCCGGAAACAACTGGGCCAAGGGACACTACAC
CGAAGGCGCGGAGCTGATGGAGTCAGTGATGGACGTTGTCAGAAAGGAGGCTGAGAGCTGTGACTGCCTGCAGGGTTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTTCTGCTCAGTAAGATCCGGGAGGAGTACCCA
GACAGGATCATAAACACATTCAGCATCCTGCCCTCGCCCAAGGTGTCGGACACCGTGGTGGAGCCCTACAACGCCACCCT
CTCAGTCCACCAGCTCATAGAAAACGCAGATGAGACCTTTTGCATAGATAACGAAGCTCTGTATGACATATGTTCCAAGA
CCCTAAAACTGCCCACACCCACCTATGGTGACCTGAACCACCTGGTGTCTGCTACCATGAGTGGGGTCACCACGTGCCTG
CGCTTCCCGGGCCAGCTGAATGCTGACCTGCGGAAGCTGGCCGTGAACATGGTCCCGTTTCCCCGGCTGCATTTCTTCAT
GCCCGGCTTTGCCCCACTGACCAGCCGGGGCAGCCAGCAGTACCGGGCCTTGACTGTGGCTGAGCTTACCCAGCAGATGT
TTGATGCTAAGAACATGATGGCTGCCTGTGACCCCCGTCACGGCCGCTACCTAACGGCGGCTGCCATTTTCAGGGGTCGC
ATGCCCATGAGGGAGGTGGATGAACAAATGTTCAACATTCAAGATAAGAACAGCAGTTACTTTGCTGACTGGCTCCCCAA
CAACGTAAAAACAGCCGTCTGTGACATCCCACCCCGGGGGCTAAAAATGTCAGCCACCTTCATTGGGAATAATACGGCCA
TCCAGGAACTCTTCAAGCGTGTCTCAGAGCAGTTTACAGCAATGTTCAGGCGCAAGGCCTTCCTCCACTGGTACACGGGC
GAGGGCATGGATGAGATGGAATTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCTGAATATCAGCAATATCAGGA
TGCCACGGCCGAGGAGGAGGAGGATGAGGAGTATGCCGAGGAGGAGGTGGCCTAG

Library Parental gene expression (RPM)
bodymap2_liver 0 .02 RPM
bodymap2_lung 0 .04 RPM
bodymap2_breast 0 .10 RPM
bodymap2_adipose 0 .06 RPM
bodymap2_adrenal 0 .08 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 0 .19 RPM
bodymap2_prostate 0 .10 RPM
bodymap2_colon 0 .00 RPM
bodymap2_testis 0 .58 RPM
bodymap2_brain 0 .05 RPM
bodymap2_heart 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 0 .00 RPM
bodymap2_ovary 0 .02 RPM
bodymap2_kidney 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010101 ortholog_many2many 1 retrogene
retro_cjac_800,
Callithrix jacchus ENSCJAG00000011697 ortholog_many2many 1 retrogene
retro_cjac_3284,
Dipodomys ordii ENSDORG00000015889 ortholog_many2many 1 retrogene
retro_dord_254,
Homo sapiens ENSG00000104833 other_paralog 1 retrogene
retro_hsap_4751,
Homo sapiens ENSG00000173213 within_species_paralog 1 retrogene
retro_hsap_3733,
Homo sapiens ENSG00000258947 other_paralog 1 retrogene
retro_hsap_155,
Mus musculus ENSMUSG00000016255 possible_ortholog 1 retrogene
retro_mmus_1109,
Pongo abelii ENSPPYG00000011180 possible_ortholog 1 retrogene
retro_pabe_3250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3944 85.55 99.55
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Download FASTA sequences of all ENSG00000173876 retrocopies