Parental gene:

IQCB1, ENSG00000173226

Aliases:IQCB1, NPHP5, PIQ, SLSN5
Description:IQ motif containing B1 [Source:HGNC Symbol;Acc:28949]
Organism:Human (Homo sapiens)
Coordinates:3:121488609..121553926(-)


>ENSG00000173226
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGAATGTCCCTGT
TATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAAGAAAATCAAACAAGATATAT
ATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAGGGTGGTTGGACTACAATT
TCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCTTGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATT
ACTTCCATCAGCTGCAGAAAATTTTCTAGTTTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAG
AAAAAGATGAATTACTACACTTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATT
CAGAATGTACTACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGTGGTGATTTACTCAGAATAGGAAGAAAAGCCCTGTATTCAATTTTAGATGAAG
TTATTTTCAAGCTTTTTTCAACTCCTAGTCCAGTTATAAGAAGTACTGCTACAAAACTCCTACTGTTGATGGCTGAATCC
CATCAGGAAATTTTGATTTTACTGAGACAAAGTACCTGCTACAAAGGACTCAGACGTCTACTAAGTAAACAGGAAACTGG
GACTGAATTCAGTCAAGAACTTAGACAGCTTGTTGGCCTTTTAAGCCCAATGGTCTATCAGGAAGTAGAAGAGCAGAAAC
TACATCAAGCAGCATGCTTGATTCAAGCCTATTGGAAGGGTTTTCAGACAAGAAAGAGATTAAAGAAGCTTCCATCTGCT
GTGATTGCTTTGCAGAGGAGTTTCAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAGAGGA
CCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG
TTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATCAGCACTGATTATCCAGAAACATTGGAGAGGG
TACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGCAGCTGTCACACTTCAAAGAGCAGC
GCTTAAATTCCTAGCGAAGTGCCGTAAGAAAAAGAAACTATTTGCTCCTTGGCGAGGACTCCAAGAACTCACTGATGCAC
GCCGAGTTGAACTGAAGAAACGAGTGGATGACTATGTCAGAAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGG
GAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAG
AGAAGCTCTGATAGCACAGATCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGAGGCAGAAGGGAAAG
AACCTGAGCTCTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATA
CAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTAGTATAGAATT
AGAAAATTTATTCATTGGTGGAACCAAACCACCTTAG

Library Parental gene expression (RPM)
bodymap2_liver 3 .84 RPM
bodymap2_lung 25 .98 RPM
bodymap2_breast 13 .31 RPM
bodymap2_adipose 13 .12 RPM
bodymap2_adrenal 20 .06 RPM
bodymap2_skeletal_muscle 6 .62 RPM
bodymap2_thyroid 10 .36 RPM
bodymap2_prostate 28 .21 RPM
bodymap2_colon 11 .49 RPM
bodymap2_testis 54 .86 RPM
bodymap2_brain 20 .96 RPM
bodymap2_heart 8 .90 RPM
bodymap2_white_blood_cells 15 .61 RPM
bodymap2_lymph_node 21 .69 RPM
bodymap2_ovary 30 .25 RPM
bodymap2_kidney 13 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000028124 ortholog_one2one 1 retrogene
retro_ggor_2324,
Otolemur garnettii ENSOGAG00000004271 ortholog_one2one 1 retrogene
retro_ogar_3056,
Pongo abelii ENSPPYG00000013494 ortholog_one2one 1 retrogene
retro_pabe_2845,
Pan troglodytes ENSPTRG00000015281 ortholog_one2one 1 retrogene
retro_ptro_2333,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3441 87.42 79.77
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Download FASTA sequences of all ENSG00000173226 retrocopies