Parental gene: | IQCB1, ENSPTRG00000015281 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:125140427..125205571(-) |
>ENSPTRG00000015281
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGAATGTCCCTGT
TATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAAGAAAATCAAACAAGATATAT
ATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAGGGTGGTTGGACTACAATT
TCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGACTTGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATT
ACTTCCATCAGCTGCAGAAAATTTTCTAGTTTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAG
AAAAAGATGAATTACTACACTTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATT
CAGAATGTACTACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGTGGTGATTTACTCAGAATAGGAAGAAAAGCCCTGTATTCAATTTTAGATGAAG
TTATTTTCAAGCTTTTTTCAACTCCTAGTCCAGTTATAAGAAGTACTGCTACAAAACTCCTACTGTTGATGGCTGAATCC
CATCAGGAAATTTTGATTTTACTGAGACAAAGTACCTGCTACAAAGGACTCAGACGTCTACTAAGTAAACAGGAAACTGG
GACTAAATTCAGTCAAGAACTTAGACAGCTTGTTGGCCTTTTAAGCCCAATGGTCTATCAGGAAGTAGAAGAGCAGAAAC
TACATCAAGCAGCATGCTTGATTCAAGCCTATTGGAAGGGTTTTCAGACAAGAAAGAGATTAAAGAAGCTTCCATCTGCT
GTGATTGCTTTGCAGAGGAGTTTCAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAGAGGA
CCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG
TTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATCAGCACTGATTATCCAGAAACATTGGAGAGGG
TACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGCAGCTGTCACACTTCAAAGAGCAGC
GCTTAAATTCCTAGCAAAGTGCCGTAAGAAAAAGAAACTATTTGCTCCTTGGCGAGGACTCCAAGAACTCACTGATGCAC
GCCGAGTTGAACTGAAGAAACAAGTGGATGACTATGTCAGAAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGG
GAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAG
AGAAGCTCTGATGGCACAGATCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGGGGCAGAAGGGAAAG
AACCTGAGCTCTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATA
CAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTAGTATAGAATT
AGAAACTGTATTCATTGGTGGAACCAAACCACCTTAG
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGAATGTCCCTGT
TATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAAGAAAATCAAACAAGATATAT
ATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAGGGTGGTTGGACTACAATT
TCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGACTTGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATT
ACTTCCATCAGCTGCAGAAAATTTTCTAGTTTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAG
AAAAAGATGAATTACTACACTTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATT
CAGAATGTACTACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGTGGTGATTTACTCAGAATAGGAAGAAAAGCCCTGTATTCAATTTTAGATGAAG
TTATTTTCAAGCTTTTTTCAACTCCTAGTCCAGTTATAAGAAGTACTGCTACAAAACTCCTACTGTTGATGGCTGAATCC
CATCAGGAAATTTTGATTTTACTGAGACAAAGTACCTGCTACAAAGGACTCAGACGTCTACTAAGTAAACAGGAAACTGG
GACTAAATTCAGTCAAGAACTTAGACAGCTTGTTGGCCTTTTAAGCCCAATGGTCTATCAGGAAGTAGAAGAGCAGAAAC
TACATCAAGCAGCATGCTTGATTCAAGCCTATTGGAAGGGTTTTCAGACAAGAAAGAGATTAAAGAAGCTTCCATCTGCT
GTGATTGCTTTGCAGAGGAGTTTCAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAGAGGA
CCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG
TTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATCAGCACTGATTATCCAGAAACATTGGAGAGGG
TACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGCAGCTGTCACACTTCAAAGAGCAGC
GCTTAAATTCCTAGCAAAGTGCCGTAAGAAAAAGAAACTATTTGCTCCTTGGCGAGGACTCCAAGAACTCACTGATGCAC
GCCGAGTTGAACTGAAGAAACAAGTGGATGACTATGTCAGAAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGG
GAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAG
AGAAGCTCTGATGGCACAGATCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGGGGCAGAAGGGAAAG
AACCTGAGCTCTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATA
CAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTAGTATAGAATT
AGAAACTGTATTCATTGGTGGAACCAAACCACCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .26 RPM |
| SRP007412_cerebellum | 12 .51 RPM |
| SRP007412_heart | 5 .13 RPM |
| SRP007412_kidney | 7 .22 RPM |
| SRP007412_liver | 3 .21 RPM |
| SRP007412_testis | 28 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000173226 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028124 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004271 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013494 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2333 | 87.84 | 61.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000015281 retrocopies