Parental gene: | NMNAT1, ENSG00000173614 |
| Aliases: | NMNAT1, LCA9, NMNAT, PNAT1 |
| Description: | nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:17877] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:10003485..10045559(+) |
>ENSG00000173614
ATGGAAAATTCCGAGAAGACTGAAGTGGTTCTCCTTGCTTGTGGTTCATTCAATCCCATCACCAACATGCACCTCAGGTT
GTTTGAGCTGGCCAAGGACTACATGAATGGAACAGGAAGGTACACAGTTGTCAAAGGCATCATCTCTCCTGTTGGTGATG
CCTACAAGAAGAAAGGACTCATTCCTGCCTATCACCGGGTCATCATGGCAGAACTTGCTACCAAGAATTCTAAATGGGTG
GAAGTTGATACATGGGAAAGTCTTCAGAAGGAGTGGAAAGAGACTCTGAAGGTGCTAAGACACCATCAAGAGAAATTGGA
GGCTAGTGACTGTGATCACCAGCAGAACTCACCTACTCTAGAAAGGCCTGGAAGGAAGAGGAAGTGGACTGAAACACAAG
ATTCTAGTCAAAAGAAATCCCTAGAGCCAAAAACAAAAGCTGTGCCAAAGGTCAAGCTGCTGTGTGGGGCAGATTTATTG
GAGTCCTTTGCTGTTCCCAATTTGTGGAAGAGTGAAGACATCACCCAAATCGTGGCCAACTATGGGCTCATATGTGTTAC
TCGGGCTGGAAATGATGCTCAGAAGTTTATCTATGAATCGGATGTGCTGTGGAAACACCGGAGCAACATTCACGTGGTGA
ATGAATGGATCGCTAATGACATCTCATCCACAAAAATCCGGAGAGCCCTCAGAAGGGGCCAGAGCATTCGCTACTTGGTA
CCAGATCTTGTCCAAGAATACATTGAAAAGCATAATTTGTACAGCTCTGAGAGTGAAGACAGGAATGCTGGGGTCATCCT
GGCCCCTTTGCAGAGAAACACTGCAGAAGCTAAGACATAG
ATGGAAAATTCCGAGAAGACTGAAGTGGTTCTCCTTGCTTGTGGTTCATTCAATCCCATCACCAACATGCACCTCAGGTT
GTTTGAGCTGGCCAAGGACTACATGAATGGAACAGGAAGGTACACAGTTGTCAAAGGCATCATCTCTCCTGTTGGTGATG
CCTACAAGAAGAAAGGACTCATTCCTGCCTATCACCGGGTCATCATGGCAGAACTTGCTACCAAGAATTCTAAATGGGTG
GAAGTTGATACATGGGAAAGTCTTCAGAAGGAGTGGAAAGAGACTCTGAAGGTGCTAAGACACCATCAAGAGAAATTGGA
GGCTAGTGACTGTGATCACCAGCAGAACTCACCTACTCTAGAAAGGCCTGGAAGGAAGAGGAAGTGGACTGAAACACAAG
ATTCTAGTCAAAAGAAATCCCTAGAGCCAAAAACAAAAGCTGTGCCAAAGGTCAAGCTGCTGTGTGGGGCAGATTTATTG
GAGTCCTTTGCTGTTCCCAATTTGTGGAAGAGTGAAGACATCACCCAAATCGTGGCCAACTATGGGCTCATATGTGTTAC
TCGGGCTGGAAATGATGCTCAGAAGTTTATCTATGAATCGGATGTGCTGTGGAAACACCGGAGCAACATTCACGTGGTGA
ATGAATGGATCGCTAATGACATCTCATCCACAAAAATCCGGAGAGCCCTCAGAAGGGGCCAGAGCATTCGCTACTTGGTA
CCAGATCTTGTCCAAGAATACATTGAAAAGCATAATTTGTACAGCTCTGAGAGTGAAGACAGGAATGCTGGGGTCATCCT
GGCCCCTTTGCAGAGAAACACTGCAGAAGCTAAGACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 5 .13 RPM |
| bodymap2_lung | 3 .96 RPM |
| bodymap2_breast | 13 .44 RPM |
| bodymap2_adipose | 8 .65 RPM |
| bodymap2_adrenal | 7 .82 RPM |
| bodymap2_skeletal_muscle | 7 .42 RPM |
| bodymap2_thyroid | 14 .74 RPM |
| bodymap2_prostate | 9 .28 RPM |
| bodymap2_colon | 10 .81 RPM |
| bodymap2_testis | 12 .86 RPM |
| bodymap2_brain | 7 .74 RPM |
| bodymap2_heart | 14 .88 RPM |
| bodymap2_white_blood_cells | 9 .84 RPM |
| bodymap2_lymph_node | 8 .39 RPM |
| bodymap2_ovary | 13 .40 RPM |
| bodymap2_kidney | 19 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001361 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005483 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005863 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009375 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000023212 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000033037 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_247 | 71.77 | 73.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2740 | 79.89 | 67.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2989 | 79.72 | 99.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000173614 retrocopies