Parental gene:

CTDNEP1, ENSG00000175826

Aliases:CTDNEP1, DULLARD, HSA011916, NET56
Description:CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:19085]
Organism:Human (Homo sapiens)
Coordinates:17:7146909..7155810(-)


>ENSG00000175826
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TCTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGATATCCTCCCCTTATCTCCTGTGTCCCGGA
ATCGGCTAGCCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCACCATGATGGGGTC
CTGAGGCCCACAGTCCGGCCTGGTACGCCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGGCCCCATGTGGATTTCTTCCTGGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTTACAGCAAGCA
TGGAGATCTATGGCTCTGCTGTGGCAGATAAACTGGACAATAGCAGAAGCATTCTTAAGAGGAGATATTACAGACAGCAC
TGCACTTTGGAGTTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCCAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGACCCCAGCGACACAGCCC
TTCTCAACCTGCTCCCAATGCTGGATGCCCTCAGGTTCACCGCTGATGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CATCGGCTCTGGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 77 .44 RPM
bodymap2_adrenal 87 .67 RPM
bodymap2_brain 49 .01 RPM
bodymap2_breast 76 .62 RPM
bodymap2_colon 85 .43 RPM
bodymap2_heart 40 .43 RPM
bodymap2_kidney 57 .53 RPM
bodymap2_liver 21 .48 RPM
bodymap2_lung 67 .81 RPM
bodymap2_lymph_node 97 .07 RPM
bodymap2_ovary 85 .34 RPM
bodymap2_prostate 76 .17 RPM
bodymap2_skeletal_muscle 169 .69 RPM
bodymap2_testis 72 .64 RPM
bodymap2_thyroid 83 .86 RPM
bodymap2_white_blood_cells 123 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019443 ortholog_one2one 1 retrogene
retro_btau_915,
Dasypus novemcinctus ENSDNOG00000013673 ortholog_one2one 2 retrogenes
retro_dnov_1802, retro_dnov_2494,
Echinops telfairi ENSETEG00000004654 ortholog_one2one 1 retrogene
retro_etel_125,
Gorilla gorilla ENSGGOG00000013777 ortholog_one2one 2 retrogenes
retro_ggor_1338, retro_ggor_1874,
Macaca mulatta ENSMMUG00000010547 ortholog_one2one 1 retrogene
retro_mmul_2011,
Mus musculus ENSMUSG00000018559 ortholog_one2one 1 retrogene
retro_mmus_1023,
Otolemur garnettii ENSOGAG00000004389 ortholog_one2one 1 retrogene
retro_ogar_1001,
Pongo abelii ENSPPYG00000007902 ortholog_one2one 2 retrogenes
retro_pabe_2294, retro_pabe_2645,
Pan troglodytes ENSPTRG00000008668 ortholog_one2one 2 retrogenes
retro_ptro_1814, retro_ptro_2256,
Drosophila melanogaster FBgn0029067 ortholog_one2many 1 retrogene
retro_dmel_18,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2687 93.06 100.00
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2. retro_hsap_3188 85.66 100.00
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Download FASTA sequences of all ENSG00000175826 retrocopies