Parental gene:

SEPT10, ENSG00000186522

Aliases:None
Description:septin 10 [Source:HGNC Symbol;Acc:14349]
Organism:Human (Homo sapiens)
Coordinates:2:110300558..110371783(-)


>ENSG00000186522
ATGGCCTCCTCCGAGGTGGCGCGGCACCTGCTCTTTCAGTCTCACATGGCAACGAAAACAACTTGTATGTCTTCACAAGG
ATCAGATGATGAACAGATAAAAAGAGAAAACATTCGTTCGTTGACTATGTCTGGCCATGTTGGTTTTGAGAGTTTGCCTG
ATCAGCTGGTGAACAGATCCATTCAGCAAGGTTTCTGCTTTAATATTCTCTGTGTGGGGGAAACTGGAATTGGAAAATCA
ACACTGATTGACACATTGTTTAATACTAATTTTGAAGACTATGAATCCTCACATTTTTGCCCAAATGTTAAACTTAAAGC
TCAGACATATGAACTCCAGGAAAGTAATGTTCAATTGAAATTGACCATTGTGAATACAGTGGGATTTGGTGACCAAATAA
ATAAAGAAGAGAGCTACCAACCAATAGTTGACTACATAGATGCTCAGTTTGAGGCCTATCTCCAAGAAGAACTGAAGATT
AAGCGTTCTCTCTTTACCTACCATGATTCTCGCATCCATGTGTGTCTCTACTTCATTTCACCGACAGGCCACTCTCTGAA
GACACTTGATCTCTTAACCATGAAGAACCTTGACAGCAAGGTAAACATTATACCAGTGATTGCCAAAGCAGATACGGTTT
CTAAAACTGAATTACAGAAGTTTAAGATCAAGCTCATGAGTGAATTGGTCAGCAATGGCGTCCAGATATACCAGTTCCCA
ACGGATGATGACACTATTGCTAAGGTCAACGCTGCAATGAATGGACAGTTGCCGTTTGCTGTTGTGGGAAGTATGGATGA
GGTAAAAGTCGGAAACAAGATGGTCAAAGCTCGCCAGTACCCTTGGGGTGTTGTACAAGTGGAAAATGAAAACCACTGTG
ACTTTGTAAAGCTGCGGGAAATGCTCATTTGTACAAATATGGAGGACCTGCGAGAGCAGACCCATACCAGGCACTATGAG
CTTTACAGGCGCTGCAAACTGGAGGAAATGGGCTTTACAGATGTGGGCCCAGAAAACAAGCCAGTCAGTGTTCAAGAGAC
CTATGAAGCCAAAAGACATGAGTTCCATGGTGAACGTCAGAGGAAGGAAGAAGAAATGAAACAGATGTTTGTGCAGCGAG
TAAAGGAGAAAGAAGCCATATTGAAAGAAGCTGAGAGAGAGCTACAGGCCAAATTTGAGCACCTTAAGAGACTTCACCAA
GAAGAGAGAATGAAGCTTGAAGAAAAGAGAAGACTTTTGGAAGAAGAAATAATTGCTTTCTCTAAAAAGAAAGCTACCTC
CGAGATATTTCACAGCCAGTCCTTTCTGGCAACAGGCAGCAACCTGAGGAAGGACAAGGACCGTAAGAACTCCAATTTTT
TGTAA

Library Parental gene expression (RPM)
bodymap2_liver 46 .28 RPM
bodymap2_lung 105 .89 RPM
bodymap2_breast 96 .60 RPM
bodymap2_adipose 139 .86 RPM
bodymap2_adrenal 73 .03 RPM
bodymap2_skeletal_muscle 58 .06 RPM
bodymap2_thyroid 82 .41 RPM
bodymap2_prostate 159 .74 RPM
bodymap2_colon 144 .96 RPM
bodymap2_testis 152 .31 RPM
bodymap2_brain 38 .28 RPM
bodymap2_heart 55 .81 RPM
bodymap2_white_blood_cells 8 .43 RPM
bodymap2_lymph_node 65 .09 RPM
bodymap2_ovary 82 .91 RPM
bodymap2_kidney 92 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017754 ortholog_one2one 3 retrogenes
retro_cjac_1736, retro_cjac_2879, retro_cjac_828,
Homo sapiens ENSG00000122545 other_paralog 2 retrogenes
retro_hsap_3810, retro_hsap_4202,
Gorilla gorilla ENSGGOG00000013659 ortholog_one2one 1 retrogene
retro_ggor_2728,
Myotis lucifugus ENSMLUG00000017273 ortholog_one2one 1 retrogene
retro_mluc_2285,
Nomascus leucogenys ENSNLEG00000001328 ortholog_one2one 1 retrogene
retro_nleu_2111,
Pongo abelii ENSPPYG00000012144 ortholog_one2one 1 retrogene
retro_pabe_3335,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4060 90.16 89.56
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Download FASTA sequences of all ENSG00000186522 retrocopies