Parental gene:

PRAMEF10, ENSG00000187545

Aliases:None
Description:PRAME family member 10 [Source:HGNC Symbol;Acc:27997]
Organism:Human (Homo sapiens)
Coordinates:1:12952726..12958101(-)


>ENSG00000187545
ATGAGCCTCCAGGCCCCATCCAGACTGCTGGAGCTGGCAGGGCAGAGCCTGCTGAGGAACCAGTTCTTGACCATCTTCAC
CCTGGATGAGCTGCCCAGGGAGGTCTTCCCTCTGATGTTCATGGAGGCCTTCAGCATGAGACGTTTTGAGGCCCTGAAGC
TGATGGTGCAGGCCTGGCCCTTCCTCAGCCTCCCTCTGGGATCCCTGATGAAGACACTTCATCTGGAGACCTTGCAAGCT
GTCCTGAGGGGACTTGATACACTGGTGGCCCAGAAGGTTCGCCCCAGGAGGTGGAAACTTCAAGTGCTGGATTTGCGGGA
TGTTGATGAGAATTTCTGGACCATATGGTCTGGAGCCAGGGTCCTCTCCTGCTCCCCAGAGGCCATGAGTAAGAGGCAGA
CAGTGGAGGACTGTCCAAGGATGGGAGAGCACCAGCCCTTGAAGGTGTTCATAGACCTCTGCCTAAAGGAAAGTACACTG
GATGAATGCCTGAGCTACCTTTTTGGGTGGATCCACTACAGAAGAGGCCTAGTGCACCTGTGTTGTAGTAAGGTGCAGAA
TTACTCAATGCCCACTTCAAGTTTCAGAAATCTATTGGAAAGGATATACCCAGACAGTATCCAGGAGTTGGAAGTCTGGA
AAAAGTGCTCTCTCAATAAAACGGGAAAGTTTGCCCCTTACCTGAGCCAGATGAGCAATCTTCGTGAACTCTTTTTAGCC
TTCGGTTATGAGCGTGAGTTGTACGTGAGCGTCCAGTGGCCGTGCATTCCTGACTTGGACTCTCCATTCCTCTGCCTGTA
CTACCCCCAGATGCTTTATATAAAAAAGATCAGTAATATCAAAGAGCACCTGGAGCACCTGCTCAGGTACCTCAAGAACC
CCTTGGGGGCCTTTATATTCAGTGATGCTTACCTAACTGATCGGGACATGGAGTGTCTGTCTCAGTACCCAAGCCTCAGT
CAGCTAAAGGAGCTGCGTCTGATTCATATCCTAATGTGGACCACCCATCTTGAGCCCCTTGGAGTTCTGCTGGAGAAAGT
TGCTGCTACTCTCAAGACCCTCGTCTTAAAGGACTGTCGGATCCAGGACCCCCAACTCAGGGTCCTCCTGCCTGCCCTGA
GCCACTGTTCCCAGCTCACCACCTTCAACTTTCATGGAAATGAGACCTCCATGAATGCTCTGAAAGACCTGCTGCGTCAC
ACAGGCGGGCTGAGCAAGTTAGGCCTGGAGTTGTATCCTGCCCCTCTGGAGAGTCTTGACTACAAGGGTCATGTCAATTG
GGAGATCCTCACCCCAATTCGGGCTGAGCTGATGCGTACACTCAGGGAAGTCAGGCAGCCCAAGAGGATCTTCTTTGGTC
CCGTCCCTTGCCCTAACTGTGGCTCATGGCCATCTGAGAAAGTGGACTTCCATCTTTGCTCCTAG

Library Parental gene expression (RPM)
bodymap2_liver 0 .00 RPM
bodymap2_lung 0 .00 RPM
bodymap2_breast 0 .00 RPM
bodymap2_adipose 0 .00 RPM
bodymap2_adrenal 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_testis 0 .00 RPM
bodymap2_brain 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 0 .00 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_kidney 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013324 ortholog_many2many 1 retrogene
retro_dord_231,
Mus musculus ENSMUSG00000025839 ortholog_many2many 1 retrogene
retro_mmus_557,
Otolemur garnettii ENSOGAG00000000273 ortholog_many2many 2 retrogenes
retro_ogar_1100, retro_ogar_1238,
Ochotona princeps ENSOPRG00000009716 ortholog_many2many 1 retrogene
retro_opri_661,
Pan troglodytes ENSPTRG00000029629 ortholog_one2one 1 retrogene
retro_ptro_330,
Rattus norvegicus ENSRNOG00000042820 ortholog_many2many 1 retrogene
retro_rnor_1371,
Rattus norvegicus ENSRNOG00000048835 ortholog_many2many 1 retrogene
retro_rnor_396,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_220 77.73 99.58
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Download FASTA sequences of all ENSG00000187545 retrocopies