Parental gene:

RGD1561226, ENSRNOG00000048835

Aliases:None
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:14:15653422..15656050(+)


>ENSRNOG00000048835
ATGAGTTTTCAGACCCCACCCACACTCCAGAAGCTGGCAAGGCAAACTCTGCTGAGAAATGAGGCTGTGGCCATGTCCTG
TGTGGGGGAGCTGCCTATTGTGCTCTTCCCAGCACTGTTCAAGGAGGCATTCGAGGGCAGACACATCAACCTCGTGAAGG
AAATGGTGGCAGCTTGGCCTTTCCCCTGTCTCCCTGTGGGGGCATTGATGAAGACACCTAATGCAGAAACCTTGCAGGCT
GTGCTAGATGGAGTAGACATGCGACTGACAAGAAAGTTTCACCCCAGGAGGATAAAACTACAGGTCCTTGATCTGAGAAA
TGTGAAGCATGCCTTCTGGAACACATGGACTGGAGCAGAGGACTGCAGCTGTTCAGCAGAGAACTTGGAGGAAAAGCAAG
TAGTGAAGGTCTTTCCTAGATATGCACTGAGGCGGCAACGTGTGAAAGTCATAACTGAACTGTCCATCTTTTCCTGCCTC
GAAGAACAACAAGCATGCTTCTTAAAGTGGGCCCAAGAAAGAATGGGCTCCCTATATTTCTGCTGTACAAAGATGAAGAT
CTGGGATTTGCCAGTCTGTGTTATCAGAGAGATCTTGAATGTTTTTGATCCACAGCATATCACAGAATTAGAACTGCATA
CTGAATGGACCCTGTTAGAGCTGGAACATTTTGCTCCCTACTTTGGACAGATGAGAAATCTTCGCAAAGTCTTCCTGGAA
CCCTTCCACAAGGTGACCTTGTCTAATAGAAATGAAACAAGGGACAGAGAAGCCAAGTGTATCAAGAAGTTTATATCTCA
GTTTTCAAAATTCAATTGTCTCCAGCATCTCTGCATGTTCTGCACCCATTTTCTTAGAGATCATATGAATCAAGTCCTAG
GGTGCCTGATGACTCCTTTGGAAACTCTCTCAGTTACTTGCTGTGTAATTTCACAGAACGACTTGGATTCCTTCTCCTGC
TGTCTGAGCCTCTTTCACCTAAAACATCTGGATTTGAGAGGAGTGGTTTTACATGATTTGGATGTTATGCCTCTGAGAGT
TCTCCTAGAGAAAGTGGCAGACACTCTTGAGACTCTGGATTTGCAGTGGTGTAGGATGAAGAACTCTCAGCTTTATGCCC
TCCTACCTGCCCTCAGACATTGCTCTCAGCTCACCACAGTCAAGTTCTACAGCAACAAATTCTCCATGCCCATTCTGAAG
GACCTGTTGCAGCACACAGCCAACTGGAGCAAGGTGAACGTGGAACAATACCCTGCCCCTCAGGAGTGCTATGATGACTC
CTCTCAAGTTTCTGTAGAAAGATTTTCCCAACTTTGTCATGAGCTCATGGATACACACAGGGCAATAAGGCAGCCCAAGA
ACATCTCCTTTGCTACAGAAATCTGTTATACATGTGGTGAGCGCTGTGTCTATCACAATGGGCCCAGGCTTTGTTGTTGC
TTGCAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .07 RPM
SRP017611_brain 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013324 possible_ortholog 1 retrogene
retro_dord_231,
Homo sapiens ENSG00000187545 ortholog_many2many 1 retrogene
retro_hsap_220,
Otolemur garnettii ENSOGAG00000000273 ortholog_many2many 2 retrogenes
retro_ogar_1100, retro_ogar_1238,
Ochotona princeps ENSOPRG00000009716 ortholog_many2many 1 retrogene
retro_opri_661,
Pan troglodytes ENSPTRG00000029629 ortholog_many2many 1 retrogene
retro_ptro_330,
Rattus norvegicus ENSRNOG00000042820 within_species_paralog 1 retrogene
retro_rnor_1371,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_396 64.38 99.59
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000048835 retrocopies