Parental gene:

FAM92A1, ENSG00000188343

Aliases:None
Description:family with sequence similarity 92, member A1 [Source:HGNC Symbol;Acc:30452]
Organism:Human (Homo sapiens)
Coordinates:8:94710788..94743755(+)


>ENSG00000188343
ATGATGAGGCGCACCCTGGAAAACCGGAACGCTCAAACGAAACAACTGCAAACAGCTGTCTCAAATGTGGAGAAGCATTT
TGGAGAACTGTGCCAAATCTTCGCTGCCTATGTGCGGAAAACTGCCAGGCTGAGAGACAAAGCAGACCTCCTGGTGAATG
AAATTAACGCGTATGCTGCTACAGAGACCCCGCATTTAAAGCTGGGCCTGATGAACTTTGCAGATGAGTTTGCCAAACTT
CAGGATTATCGACAAGCAGAGGTTGAAAGACTTGAAGCCAAAGTAGTTGAACCCTTGAAAACTTATGGGACCATTGTGAA
AATGAAACGGGATGACCTCAAAGCAACACTCACAGCAAGGAATCGAGAAGCTAAGCAATTAACTCAGTTAGAAAGAACAC
GTCAGCGAAACCCATCTGATCGACATGTTATTTCACAGGCAGAAACGGAATTACAGAGAGCTGCAATGGATGCTAGCCGA
ACAAGTCGTCATCTGGAGGAAACTATTAACAACTTTGAAAGGCAGAAAATGAAGGATATAAAGACTATATTTTCTGAATT
TATCACAATCGAAATGTTATTTCACGGCAAAGCTTTAGAGGTCTACACTGCTGCCTACCAGAATATACAAAACATTGATG
AAGATGAAGATTTAGAGGTTTTCCGAAATTCTCTGTATGCACCAGATTATTCATCTCGTTTAGATATTGTAAGAGCAAAT
TCAAAGTCACCTCTTCAGAGATCACTGTCAGCTAAGTGTGTATCTGGAACAGGACAGGTATCCACTTGTCGACTAAGAAA
GGATCAACAAGCAGAAGATGATGAGGATGACGAGTTAGATGTTACAGAAGAAGAAAATTTTCTTAAGTAA

Library Parental gene expression (RPM)
bodymap2_liver 10 .33 RPM
bodymap2_lung 11 .78 RPM
bodymap2_breast 26 .95 RPM
bodymap2_adipose 16 .22 RPM
bodymap2_adrenal 16 .25 RPM
bodymap2_skeletal_muscle 4 .78 RPM
bodymap2_thyroid 25 .12 RPM
bodymap2_prostate 26 .41 RPM
bodymap2_colon 21 .97 RPM
bodymap2_testis 90 .21 RPM
bodymap2_brain 25 .81 RPM
bodymap2_heart 23 .59 RPM
bodymap2_white_blood_cells 7 .97 RPM
bodymap2_lymph_node 13 .43 RPM
bodymap2_ovary 34 .97 RPM
bodymap2_kidney 35 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009105 ortholog_one2one 1 retrogene
retro_cfam_1072,
Echinops telfairi ENSETEG00000013003 ortholog_one2many 1 retrogene
retro_etel_522,
Gorilla gorilla ENSGGOG00000006452 ortholog_one2one 1 retrogene
retro_ggor_1137,
Loxodonta africana ENSLAFG00000003954 ortholog_one2one 1 retrogene
retro_lafr_201,
Microcebus murinus ENSMICG00000006797 ortholog_one2one 1 retrogene
retro_mmur_415,
Monodelphis domestica ENSMODG00000007447 ortholog_one2many 2 retrogenes
retro_mdom_1239, retro_mdom_827,
Mustela putorius furo ENSMPUG00000009112 ortholog_one2one 1 retrogene
retro_mputfur_1183,
Nomascus leucogenys ENSNLEG00000002773 ortholog_one2one 1 retrogene
retro_nleu_1707,
Otolemur garnettii ENSOGAG00000002972 ortholog_one2one 1 retrogene
retro_ogar_654,
Oreochromis niloticus ENSONIG00000002446 ortholog_one2one 1 retrogene
retro_onil_57,
Procavia capensis ENSPCAG00000011171 ortholog_one2many 1 retrogene
retro_pcap_272,
Pongo abelii ENSPPYG00000018744 ortholog_one2one 2 retrogenes
retro_pabe_1235, retro_pabe_2497,
Tarsius syrichta ENSTSYG00000012502 ortholog_one2one 1 retrogene
retro_tsyr_975,
Tursiops truncatus ENSTTRG00000012378 ortholog_one2one 1 retrogene
retro_ttru_45,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1485 95.88 67.13
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Download FASTA sequences of all ENSG00000188343 retrocopies