Parental gene: | XRCC6, ENSG00000196419 |
| Aliases: | XRCC6, CTC75, CTCBF, G22P1, KU70, ML8, TLAA |
| Description: | X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:HGNC Symbol;Acc:4055] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 22:42017122..42060044(+) |
>ENSG00000196419
ATGTCAGGGTGGGAGTCATATTACAAAACCGAGGGCGATGAAGAAGCAGAGGAAGAACAAGAAGAGAACCTTGAAGCAAG
TGGAGACTATAAATATTCAGGAAGAGATAGTTTGATTTTTTTGGTTGATGCCTCCAAGGCTATGTTTGAATCTCAGAGTG
AAGATGAGTTGACACCTTTTGACATGAGCATCCAGTGTATCCAAAGTGTGTACATCAGTAAGATCATAAGCAGTGATCGA
GATCTCTTGGCTGTGGTGTTCTATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAAAAATATTTACGTCTTACAGGA
GCTGGATAATCCAGGTGCAAAACGAATTCTAGAGCTTGACCAGTTTAAGGGGCAGCAGGGACAAAAACGTTTCCAAGACA
TGATGGGCCACGGATCTGACTACTCACTCAGTGAAGTGCTGTGGGTCTGTGCCAACCTCTTTAGTGATGTCCAATTCAAG
ATGAGTCATAAGAGGATCATGCTGTTCACCAATGAAGACAACCCCCATGGCAATGACAGTGCCAAAGCCAGCCGGGCCAG
GACCAAAGCCGGTGATCTCCGAGATACAGGCATCTTCCTTGACTTGATGCACCTGAAGAAACCTGGGGGCTTTGACATAT
CCTTGTTCTACAGAGATATCATCAGCATAGCAGAGGATGAGGACCTCAGGGTTCACTTTGAGGAATCCAGCAAGCTAGAA
GACCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGCACTCAGCAGGTTAAAGCTGAAGCTCAACAAAGATAT
AGTGATCTCTGTGGGCATTTATAATCTGGTCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGGGAAACAAATG
AACCAGTGAAAACCAAGACCCGGACCTTTAATACAAGTACAGGCGGTTTGCTTCTGCCTAGCGATACCAAGAGGTCTCAG
ATCTATGGGAGTCGTCAGATTATACTGGAGAAAGAGGAAACAGAAGAGCTAAAACGGTTTGATGATCCAGGTTTGATGCT
CATGGGTTTCAAGCCGTTGGTACTGCTGAAGAAACACCATTACCTGAGGCCCTCCCTGTTCGTGTACCCAGAGGAGTCGC
TGGTGATTGGGAGCTCAACCCTGTTCAGTGCTCTGCTCATCAAGTGTCTGGAGAAGGAGGTTGCAGCATTGTGCAGATAC
ACACCCCGCAGGAACATCCCTCCTTATTTTGTGGCTTTGGTGCCACAGGAAGAAGAGTTGGATGACCAGAAAATTCAGGT
GACTCCTCCAGGCTTCCAGCTGGTCTTTTTACCCTTTGCTGATGATAAAAGGAAGATGCCCTTTACTGAAAAAATCATGG
CAACTCCAGAGCAGGTGGGCAAGATGAAGGCTATCGTTGAGAAGCTTCGCTTCACATACAGAAGTGACAGCTTTGAGAAC
CCCGTGCTGCAGCAGCACTTCAGGAACCTGGAGGCCTTGGCCTTGGATTTGATGGAGCCGGAACAAGCAGTGGACCTGAC
ATTGCCCAAGGTTGAAGCAATGAATAAAAGACTGGGCTCCTTGGTGGATGAGTTTAAGGAGCTTGTTTACCCACCAGATT
ACAATCCTGAAGGGAAAGTTACCAAGAGAAAACACGATAATGAAGGTTCTGGAAGCAAAAGGCCCAAGGTGGAGTATTCA
GAAGAGGAGCTGAAGACCCACATCAGCAAGGGTACGCTGGGCAAGTTCACTGTGCCCATGCTGAAAGAGGCCTGCCGGGC
TTACGGGCTGAAGAGTGGGCTGAAGAAGCAGGAGCTGCTGGAAGCCCTCACCAAGCACTTCCAGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 245 .15 RPM |
| bodymap2_adrenal | 255 .25 RPM |
| bodymap2_brain | 212 .81 RPM |
| bodymap2_breast | 184 .01 RPM |
| bodymap2_colon | 240 .15 RPM |
| bodymap2_heart | 143 .28 RPM |
| bodymap2_kidney | 191 .36 RPM |
| bodymap2_liver | 96 .11 RPM |
| bodymap2_lung | 250 .97 RPM |
| bodymap2_lymph_node | 168 .12 RPM |
| bodymap2_ovary | 310 .45 RPM |
| bodymap2_prostate | 240 .75 RPM |
| bodymap2_skeletal_muscle | 237 .61 RPM |
| bodymap2_testis | 484 .43 RPM |
| bodymap2_thyroid | 315 .37 RPM |
| bodymap2_white_blood_cells | 276 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000015885 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000001856 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015610 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000011876 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011736 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006749 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_511 | 79.68 | 61.74 | Please wait, loading  |
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| 2. | retro_hsap_4066 | 80.94 | 55.67 | Please wait, loading |
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| 3. | retro_hsap_4880 | 84.74 | 79.62 | Please wait, loading |
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| 4. | retro_hsap_4913 | 94.91 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSG00000196419 retrocopies