Parental gene:

XRCC6, ENSGGOG00000015885

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:22:25978783..26022839(+)


>ENSGGOG00000015885
GCAGTAGCCAACATGTCAGGGTGGGAGTCATATTACAAAACCGAGGGCGATGAAGAAGCAGAGGAAGAACAAGAAGAGAA
CCTTGAAGCAAGTGGAGACTATAAATATTCAGGAAGAGATAGTTTGATTTTTTTGGTTGATGCCTCCAAGGCTATGTTTG
AATCTCAGAGTGAAGATGAGTTGACACCTTTTGACATGAGCATCCAGCAGTGTATCCAAAGTGTGTACATCAGTAAGATC
ATAAGCAGTGATCGAGATCTCTTGGCTGTGGTGTTCTATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAAAAATAT
TTACGTCTTACAGGAGCTGGATAATCCGGGTGCAAAACGAATTCTAGAGCTTGACCAGTTTAAGGGGCAGCAGGGACAAA
AACGTTTCCAAGACCTGATGGGCCACGGATCTGACTACTCACTCAGTGAAGTGCTGTGGGTCTGTGCCAACCTCTTTAGT
GATGTCCAATTCAAGATGAGTCATAAGAGGATCATGCTGTTCACCAATGAAGACAACCCCCACGGCAATGACAGTGCCAA
AGCCAGCCGGGCCAGGACCAAAGCCGGTGATCTGCGAGATACAGGCATCTTCCTTGACTTGATGCACCTGAAGAAACCTG
GGGGCTTTGACATATCCTTGTTCTACAGAGATATCATCAGCATAGCAGAGGATGAGGACCTCAGGGTTCACTTTGAGGAA
TCCAGCAAGCTAGAAGACCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGCACTCAGCAGGTTAAAGCTGAA
GCTCAACAAAGATATAGTGATCTCTGTGGGCATTTATAATCTGGTCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCT
ATCGGGAAACAAATGAACCAGTGAAAACCAAGACCCGGACCTTTAATACAAGTACAGGCGGTTTGCTTCTGCCTAGCGAT
ACCAAGAGGTCTCAGATCTATGGGAGTCGTCAGATTATACTGGAGAAAGAGGAAACAGAAGAGCTAAAACGGTTTGATGA
TCCAGGTTTGATGCTCATGGGTTTCAAGCCGTTGGTACTGCTGAAGAAACACCATTACCTGAGGCCCTCCCTGTTCGTGT
ACCCAGAGGAGTCGCTGGTGATTGGGAGCTCAACCCTGTTCAGTGCTCTGCTCATCAAGTGTCTGGAGAAGGAGGTTGCA
GCATTGTGCAGATACACACCCCGCAGGAACATTCCTCCTTATTTTGTGGCTTTGGTGCCACAGGAAGAAGAGTTGGATGA
CCAGAAAATTCAGGTGACTCCTCCAGGCTTCCAGCTGGTCTTTTTACCCTTTGCTGATGATAAAAGGAAGATGCCCTTTA
CTGAAAAAATCATGGCAACTCCAGAGCAGGTGGGCAAGATGAAGGCTATCGTTGACAAGCTTCGCTTCACATACAGAAGT
GACAGCTTTGAGAACCCCGTGCTGCAGCAGCACTTCAGGAACCTGGAGGCCTTGGCCTTGGATTTGATGGAGCCGGAACA
AGCAGTGGACCTGACATTGCCCAAGGTTGAAGCAATGAATAAAAGACTGGGCTCCTTGGTGGATGAGTTTAAGGAGCTTG
TTTACCCACCAGATTACAATCCTGAAGGGAAAGTTACCAAGAGAAAACACGATAATGAAGGTTCTGGAAGCAAAAGGCCC
AAGGTGGAGTATTCAGAAGAGGAGCTGAAGACCCACATCAGCAAGGGTACGCTGGGCAAGTTCACTGTGCCCATGCTGAA
AGAGGCCTGCCGGGCTTACGGGCTGAAGAGTGGGCTGAAGAAGCAGGAGCTGCTGGAAGCCCTCACCAAGCACTTCCAGG
ACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 146 .74 RPM
SRP007412_cerebellum 119 .38 RPM
SRP007412_heart 45 .69 RPM
SRP007412_kidney 146 .75 RPM
SRP007412_liver 85 .49 RPM
SRP007412_testis 536 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000196419 ortholog_one2one 4 retrogenes
retro_hsap_4066, retro_hsap_4880, retro_hsap_4913, retro_hsap_511,
Macaca mulatta ENSMMUG00000001856 ortholog_one2one 2 retrogenes
retro_mmul_2346, retro_mmul_430,
Nomascus leucogenys ENSNLEG00000015610 ortholog_one2one 3 retrogenes
retro_nleu_1552, retro_nleu_2287, retro_nleu_2676,
Pongo abelii ENSPPYG00000011876 ortholog_one2one 1 retrogene
retro_pabe_3821,
Tupaia belangeri ENSTBEG00000011736 ortholog_one2many 3 retrogenes
retro_tbel_1474, retro_tbel_1523, retro_tbel_3859,
Tursiops truncatus ENSTTRG00000006749 ortholog_one2many 1 retrogene
retro_ttru_289,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_471 79.74 61.24
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2. retro_ggor_3067 93.67 100.00
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Download FASTA sequences of all ENSGGOG00000015885 retrocopies