Parental gene:

EEF1G, ENSG00000254772

Aliases:EEF1G, EF1G, GIG35
Description:eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213]
Organism:Human (Homo sapiens)
Coordinates:11:62327072..62342401(-)


>ENSG00000254772
ATGGCGGCTGGGACCCTGTACACGTATCCTGAAAACTGGAGGGCCTTCAAGGCTCTCATCGCTGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCATTTTGGCCAAACCAACCGCACCCCTGAATTTCTCCGCAAATTTC
CTGCCGGCAAGGTCCCAGCATTTGAGGGTGATGATGGATTCTGTGTGTTTGAGAGCAACGCCATTGCCTACTATGTGAGC
AATGAGGAGCTGCGGGGAAGTACTCCAGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCTTTGCTGATTCCGATATAGT
GCCCCCAGCCAGTACCTGGGTGTTCCCCACCTTGGGCATCATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGG
AAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGAGTGACATTGGCT
GACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAGCAGGTTCTAGAGCCTTCTTTCCGCCAGGCCTTTCCCAATAC
CAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCTGTCTTGGGCGAAGTGAAACTGTGTGAGAAGATGG
CCCAGTTTGATGCTAAAAAGTTTGCAGAGACCCAACCTAAAAAGGACACACCACGGAAAGAGAAGGGTTCACGGGAAGAG
AAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAAAAGGCGGCTGCCCCTGCTCCTGAGGAGGAGATGGATGAATGTGA
GCAGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAATTTA
AGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCACTGCCATATTTCTGGGAGCACTTTGATAAGGACGGCTGGTCC
CTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTCAGACCTTCATGAGCTGCAATCTCATCACTGGAATGTTCCA
GCGACTGGACAAGCTGAGGAAGAATGCCTTCGCCAGTGTCATCCTTTTTGGAACCAACAATAGCAGCTCCATTTCTGGAG
TCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCATACACATGGCGG
AAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTGGGAGGGGGCCTTCCAGCATGTGGG
CAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .06 RPM
bodymap2_lung 0 .16 RPM
bodymap2_breast 0 .04 RPM
bodymap2_adipose 0 .14 RPM
bodymap2_adrenal 0 .16 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 0 .62 RPM
bodymap2_prostate 0 .09 RPM
bodymap2_colon 0 .04 RPM
bodymap2_testis 0 .02 RPM
bodymap2_brain 0 .02 RPM
bodymap2_heart 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 0 .00 RPM
bodymap2_ovary 0 .06 RPM
bodymap2_kidney 0 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015834 possible_ortholog 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Erinaceus europaeus ENSEEUG00000001231 ortholog_one2one 1 retrogene
retro_eeur_575,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2one 1 retrogene
retro_lcha_82,
Loxodonta africana ENSLAFG00000003339 ortholog_one2one 1 retrogene
retro_lafr_381,
Macaca mulatta ENSMMUG00000006598 ortholog_one2one 5 retrogenes
retro_mmul_1447, retro_mmul_1905, retro_mmul_2528, retro_mmul_736, retro_mmul_802,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Mus musculus ENSMUSG00000071644 ortholog_one2one 7 retrogenes
retro_mmus_1447, retro_mmus_1839, retro_mmus_2350, retro_mmus_2765, retro_mmus_3080, retro_mmus_425, retro_mmus_989,
Nomascus leucogenys ENSNLEG00000003528 ortholog_one2one 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Pan troglodytes ENSPTRG00000003768 ortholog_one2one 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Rattus norvegicus ENSRNOG00000020075 ortholog_one2one 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,
Ictidomys tridecemlineatus ENSSTOG00000002851 ortholog_one2one 2 retrogenes
retro_itri_852, retro_itri_886,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2778 76.98 60.41
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2. retro_hsap_2982 80.71 63.84
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3. retro_hsap_3906 98.40 100.00
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4. retro_hsap_4744 90.41 100.00
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Download FASTA sequences of all ENSG00000254772 retrocopies