Parental gene:

POUV, ENSGALG00000026574

Aliases:POUV, OCT4
Description:POU domain class 5 transcription factor 1 [Source:RefSeq peptide;Acc:NP_001103648]
Organism:Chicken (Gallus gallus)
Coordinates:17:460122..461472(-)


>ENSGALG00000026574
ATGCATGTAAAAGCCAAAAACCTGCTGCGAATGTGTAAATGGCTTAAAGGATTGCGAAATGCCCGCGGCAGCACTTGGGG
CCGTAGCGGTGGCAGGAAGCCGATGCGCTCGAGTGAGCGGCTGTCCCGAAGTGCAGATCCTGGCTGGGGGAACCACGCGA
ACCGCGCGGCTGTTGTCACCCGCGGTATCTCGAGCCATTCACCGCGTGTCTGCCTCTGCCTCTGCCAGGATGCGCCGACC
TCAGAGGAGCTGGAGCAGTTTGCCAAGGACCTCAAGCACAAGCGCATCATGCTGGGCTTCACTCAGGCTGACGTGGGGCT
GGCTCTGGGCACGCTCTATGGGAAGATGTTCAGCCAGACCACCATCTGCCGCTTCGAAGCTCTCCAGCTCAGCTTTAAGA
ACATGTGCAAGCTGAAGCCACTGCTGCAGCGTTGGCTCAATGAGGCAGAGAACACGGACAACATGCAGGAGATGTGCAAT
GCAGAGCAAGTGCTGGCCCAAGCCCGGAAGAGAAAACGCAGGACCAGCATCGAGACCAACGTGAAGGGAACGCTGGAGAG
CTTCTTCCGCAAATGTGTGAAGCCCAGTCCCCAGGAGATCTCCCAGATCGCTGAGGACCTCAACCTGGACAAAGACGTTG
TCCGGGTCTGGTTCTGCAACCGGCGTCAGAAAGGCAAGCGGCTGCTGCTGCCCTTTGGCAACGAGTCGGAGGGGGTGATG
TACGACATGAACCAGTCCCTGGTGCCCCCTGGTCTGCCCATCCCAGTGACATCCCAGGGCTACAGCCTGGCGCCGTCCCC
CCCCGTCTACATGCCACCTTTCCACAAGGCCGAGATGTTCCCCCCGCCTCTGCAGCCCGGGATCTCCATGAACAACAGCA
GCCACTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .06 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .05 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 3 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010377 possible_ortholog 3 retrogenes
retro_amel_1057, retro_amel_1213, retro_amel_1616,
Bos taurus ENSBTAG00000021111 possible_ortholog 2 retrogenes
retro_btau_1576, retro_btau_951,
Callithrix jacchus ENSCJAG00000019789 possible_ortholog 1 retrogene
retro_cjac_123,
Dipodomys ordii ENSDORG00000009549 possible_ortholog 1 retrogene
retro_dord_65,
Meleagris gallopavo ENSMGAG00000000739 ortholog_one2one 1 retrogene
retro_mgal_8,
Mustela putorius furo ENSMPUG00000001202 possible_ortholog 2 retrogenes
retro_mputfur_253, retro_mputfur_96,
Mus musculus ENSMUSG00000024406 possible_ortholog 2 retrogenes
retro_mmus_2201, retro_mmus_250,
Oryctolagus cuniculus ENSOCUG00000017160 possible_ortholog 3 retrogenes
retro_ocun_1175, retro_ocun_1696, retro_ocun_463,
Ictidomys tridecemlineatus ENSSTOG00000026103 possible_ortholog 3 retrogenes
retro_itri_1076, retro_itri_1705, retro_itri_951,
Taeniopygia guttata ENSTGUG00000002412 ortholog_one2one 1 retrogene
retro_tgut_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggal_18 63.86 56.27
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGALG00000026574 retrocopies