Parental gene: | SHQ1, ENSGGOG00000034818 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 3:74494827..74595748(-) |
>ENSGGOG00000034818
ATGCTAACCCCGGCGTTCGACCTCAGCCAGGATCCGGACTTCCTGACTATCGCCATCCGCGTGCCCTACGCCCGGGTCTC
CGAGTTCGACGTCTACTTCGAGGGGTCTGACTTCAAGTTCTACGCCAAGCCATACTTTCTCAGATTAACCCTTCCTGGAA
GAATTGTAGAAAATGGAAGCGAGCAAGGGTCCTATGATGCAGATAAAGGAATTTTTACCATTCGCCTGCCCAAAGAAACC
CCTGGCCAGCATTTTGAGGGGCTGAACATGTTAACTGCTCTTCTGGCACCAAGAAAATCCAGGACAGCAAAACCACTTGT
GGAAGAAATAGTTGCTTCTGAGATTCCTGAGGAAGTAGTTGACGATGAAGAGTTTGATTGGGAAATTGAGCAGACACCCT
ATGAAGAGGTATCAGAAAGTGCTTTGAATCCGCAGTGCCACTATGGATTTGGAAACTTACGATCAGGAGTGTTGCAGCGG
TTACAGGATGAACTGAGTGATGTTGTTGATATTAAGGATCCAGATTTCACCCCTGCAGCTGAACGAAGACAGAAGCGCCT
GGCCACTGAGCTGGCCAAGTTTGATCCTGATCATTATCTAGCTGACTTTTTTGAAGACGAGGCAATTGAACAGATTTTGA
AGTATAATCCTTGGTGGACTGACAAATATTCAAAAATGACGGCCTTTTTGGAAAAGAGTCAGGAACAAGAAAATCATGCT
ACATTAGTGTCTTTTTCTGAAGAAGAGAAATATCAGCTACGAAAATTTGTCAATAAATCTTATCTGCTGGACAAGAGAGC
CTGTCGTCAAGTGTGCTACAGTTTGATTGATATCCTTCTGGCATATTGCTATGAAACCCGTGTCACTGAAGGAGAGAAGA
ATGTTGAATCTGCATGGAATATCAGGAAACTGAGTCCAACACTATGCTGGTTTGAGACTTGGACTAACGTTCATGATATC
GTGGTGTCTTTTGGAAGAAGGGTGTTGTGTTACCCACTCTATCGCCATTTCAAGCTGGTGATGAAGGCCTACAGGGACAC
TATAAAGATATTGCAACTGGGTAAAAGTGCAGTTTTAAAGTGTCTCCTGGATATTCACAAAATTTTTCAGGAAAATGACC
CAGCGTACATACTGAATGATCTCTACATCTCAGACTACTGTGTGTGGATTCAGAAAGTCAAATCCAAAAAGTTGGCAGCT
CTTGCAGAAGCCTTAAAGGAAGTCTCCCTTACAAAGGCCCAGCTGGGGTTAGAACTGGAAGAACTAGAAGCAGCAGCATT
GCTTGTCCAGGAGGAAGAAACTGCATTAAAAGCAGCCCATTCAGTTTCTGGGCAGCAGACACTTTGCTCCAGCTCTGAGG
CAAGTGATTCGGAGGACTCAGACAGCACCGTGTCATCTGGAAACGAAGACTCAGGCTCAGATTCAGAACAAGATGAACTC
AAAGATAGTCCATCTGAGACAGTCAATTCTTTGCAAGGTCCCTTTCTTGAAGAAAGCAGTGCCCTTCTTATTGTTGATGG
TGGAGTACGCAGAAACACAGCCATCCAGGAGTCTGATGCCAGTCAAGGAAAGCCACTTTCCTCTTCCTGGCCTCTTGGAG
TGTCTGGGCCTCTGATAGAGGAGCTTGGGGAACAACTGAAGACTACAGTTCAGGTTTCTGAACCCAAGGGCACCACTGCT
GTAAACCGCAGCAATATGCAGGAGAGAGACGGCTGTCAGACACCAAATAATTGA
ATGCTAACCCCGGCGTTCGACCTCAGCCAGGATCCGGACTTCCTGACTATCGCCATCCGCGTGCCCTACGCCCGGGTCTC
CGAGTTCGACGTCTACTTCGAGGGGTCTGACTTCAAGTTCTACGCCAAGCCATACTTTCTCAGATTAACCCTTCCTGGAA
GAATTGTAGAAAATGGAAGCGAGCAAGGGTCCTATGATGCAGATAAAGGAATTTTTACCATTCGCCTGCCCAAAGAAACC
CCTGGCCAGCATTTTGAGGGGCTGAACATGTTAACTGCTCTTCTGGCACCAAGAAAATCCAGGACAGCAAAACCACTTGT
GGAAGAAATAGTTGCTTCTGAGATTCCTGAGGAAGTAGTTGACGATGAAGAGTTTGATTGGGAAATTGAGCAGACACCCT
ATGAAGAGGTATCAGAAAGTGCTTTGAATCCGCAGTGCCACTATGGATTTGGAAACTTACGATCAGGAGTGTTGCAGCGG
TTACAGGATGAACTGAGTGATGTTGTTGATATTAAGGATCCAGATTTCACCCCTGCAGCTGAACGAAGACAGAAGCGCCT
GGCCACTGAGCTGGCCAAGTTTGATCCTGATCATTATCTAGCTGACTTTTTTGAAGACGAGGCAATTGAACAGATTTTGA
AGTATAATCCTTGGTGGACTGACAAATATTCAAAAATGACGGCCTTTTTGGAAAAGAGTCAGGAACAAGAAAATCATGCT
ACATTAGTGTCTTTTTCTGAAGAAGAGAAATATCAGCTACGAAAATTTGTCAATAAATCTTATCTGCTGGACAAGAGAGC
CTGTCGTCAAGTGTGCTACAGTTTGATTGATATCCTTCTGGCATATTGCTATGAAACCCGTGTCACTGAAGGAGAGAAGA
ATGTTGAATCTGCATGGAATATCAGGAAACTGAGTCCAACACTATGCTGGTTTGAGACTTGGACTAACGTTCATGATATC
GTGGTGTCTTTTGGAAGAAGGGTGTTGTGTTACCCACTCTATCGCCATTTCAAGCTGGTGATGAAGGCCTACAGGGACAC
TATAAAGATATTGCAACTGGGTAAAAGTGCAGTTTTAAAGTGTCTCCTGGATATTCACAAAATTTTTCAGGAAAATGACC
CAGCGTACATACTGAATGATCTCTACATCTCAGACTACTGTGTGTGGATTCAGAAAGTCAAATCCAAAAAGTTGGCAGCT
CTTGCAGAAGCCTTAAAGGAAGTCTCCCTTACAAAGGCCCAGCTGGGGTTAGAACTGGAAGAACTAGAAGCAGCAGCATT
GCTTGTCCAGGAGGAAGAAACTGCATTAAAAGCAGCCCATTCAGTTTCTGGGCAGCAGACACTTTGCTCCAGCTCTGAGG
CAAGTGATTCGGAGGACTCAGACAGCACCGTGTCATCTGGAAACGAAGACTCAGGCTCAGATTCAGAACAAGATGAACTC
AAAGATAGTCCATCTGAGACAGTCAATTCTTTGCAAGGTCCCTTTCTTGAAGAAAGCAGTGCCCTTCTTATTGTTGATGG
TGGAGTACGCAGAAACACAGCCATCCAGGAGTCTGATGCCAGTCAAGGAAAGCCACTTTCCTCTTCCTGGCCTCTTGGAG
TGTCTGGGCCTCTGATAGAGGAGCTTGGGGAACAACTGAAGACTACAGTTCAGGTTTCTGAACCCAAGGGCACCACTGCT
GTAAACCGCAGCAATATGCAGGAGAGAGACGGCTGTCAGACACCAAATAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .20 RPM |
| SRP007412_cerebellum | 7 .92 RPM |
| SRP007412_heart | 2 .53 RPM |
| SRP007412_kidney | 14 .88 RPM |
| SRP007412_liver | 9 .63 RPM |
| SRP007412_testis | 20 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015131 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000144736 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002731 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013717 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015106 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_581 | 85.34 | 99.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000034818 retrocopies