Parental gene: | EEF1D, ENSMMUG00000001645 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 8:146210700..146229188(-) |
>ENSMMUG00000001645
ATGGCCTGGTGCCTCGAAGCTGCCTCCCTGTCTCACCGACCCGGTCCTCGGTCTGGCCTGTCCGTGTCCAGCCTGAGACC
CAACAGAAAAATGGCTACAAACTTCCTAGTACATGAGAAGATCTGGTTTGACAAGTTCAAATATGACGATGCAGAAAGGA
GATTCTACGAGCAGATGAACGGGCCTGTGGCCGGTGCCTCCCGCCAGGAGAATGGCGCCAGCGTGATCCTTCGTGACATT
GCGAGAGCCAGAGAGAACATCCAGAAATCCCTGGCCGGAACCTCAGGCCCCGGGGCCTCCAGCGGCCCCAGCGGAGACCA
CAGCGAGCTTGTCGTCCGGATCGCCAGTCTGGAAGTGGAGAACCAGAGCCTGCGTGGCGTGGTACAGGAGCTGCAGCAGG
CCATCTCCAAGCTGGAGGCCCGGCTGAACGTGCTGGAGAAGAGCTCGCCTGGCCACCGGGCCACGGCCCCACAGACCCAG
CACGTGTCTCCCATGCGCCAAGTGGAGCCCCCGGCCAAGAAGCCAGCCACACCAGCAGAGGATGACGAGGATGATGACAT
TGACCTGTTTGGCAGCGACAATGAGGAGGAGGACAAGGAGGCGGCACAGCTGCGGGAGGAGCGGCTGCGGCAGTACGCGG
AGAAGAAGGCCAAGAAGCCTGCACTGGTGGCCAAGTCCTCCATCCTGCTGGATGTCAAGCCTTGGGACGATGAGACGGAC
ATGGCCCAGCTGGAGGCCTGTGTGCGATCTATCCAGCTGGACGGGCTGGTCTGGGGGGCCTCCAAGCTGGTGCCCGTGGG
CTACGGTATCCGGAAGCTACAGATTCAGTGTGTGGTAGAGGACGACAAGGTGGGGACAGACTTGCTGGAGGAGGAGATCA
CCAAGTTTGAGGAGCACGTGCAGAGTGTCGATATCGCAGCTTTCAACAAGATCTGA
ATGGCCTGGTGCCTCGAAGCTGCCTCCCTGTCTCACCGACCCGGTCCTCGGTCTGGCCTGTCCGTGTCCAGCCTGAGACC
CAACAGAAAAATGGCTACAAACTTCCTAGTACATGAGAAGATCTGGTTTGACAAGTTCAAATATGACGATGCAGAAAGGA
GATTCTACGAGCAGATGAACGGGCCTGTGGCCGGTGCCTCCCGCCAGGAGAATGGCGCCAGCGTGATCCTTCGTGACATT
GCGAGAGCCAGAGAGAACATCCAGAAATCCCTGGCCGGAACCTCAGGCCCCGGGGCCTCCAGCGGCCCCAGCGGAGACCA
CAGCGAGCTTGTCGTCCGGATCGCCAGTCTGGAAGTGGAGAACCAGAGCCTGCGTGGCGTGGTACAGGAGCTGCAGCAGG
CCATCTCCAAGCTGGAGGCCCGGCTGAACGTGCTGGAGAAGAGCTCGCCTGGCCACCGGGCCACGGCCCCACAGACCCAG
CACGTGTCTCCCATGCGCCAAGTGGAGCCCCCGGCCAAGAAGCCAGCCACACCAGCAGAGGATGACGAGGATGATGACAT
TGACCTGTTTGGCAGCGACAATGAGGAGGAGGACAAGGAGGCGGCACAGCTGCGGGAGGAGCGGCTGCGGCAGTACGCGG
AGAAGAAGGCCAAGAAGCCTGCACTGGTGGCCAAGTCCTCCATCCTGCTGGATGTCAAGCCTTGGGACGATGAGACGGAC
ATGGCCCAGCTGGAGGCCTGTGTGCGATCTATCCAGCTGGACGGGCTGGTCTGGGGGGCCTCCAAGCTGGTGCCCGTGGG
CTACGGTATCCGGAAGCTACAGATTCAGTGTGTGGTAGAGGACGACAAGGTGGGGACAGACTTGCTGGAGGAGGAGATCA
CCAAGTTTGAGGAGCACGTGCAGAGTGTCGATATCGCAGCTTTCAACAAGATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 56 .40 RPM |
| SRP007412_brain | 17 .93 RPM |
| SRP007412_cerebellum | 19 .37 RPM |
| SRP007412_heart | 101 .28 RPM |
| SRP007412_kidney | 52 .11 RPM |
| SRP007412_liver | 113 .76 RPM |
| SRP007412_testis | 109 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Danio rerio | ENSDARG00000008109 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001054 | within_species_paralog | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_197 | 98.83 | 89.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_733 | 82.22 | 72.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_747 | 84.62 | 62.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1795 | 75.99 | 94.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000001645 retrocopies