>retro_drer_26
ATGAGTGGACTTCAGGGACTCGCCCAGGAGAACATCTAGTTTGACAAGTCCAGATACAACGAGGCTGAAAGATGCTTCTA
CGAGGGCGCCAACGGCATCCCTCAGACATCTCAGAGTCAGAATGCCAGCAAGTCTTAGGATAAGAGCGAACTGCCCTCAC
GTTTGAAGAGTCTTGAACTGGACAACAAGAATCAGCACAAAGTAGTGGATGAAATGAGAGCCACACTATTCAAAGTGGAG
TTCAGAATGGCCACACTGAAGAACACCCAAGCACCAGCTACAAAAGGAGTTACTGTCACCAAGGCTGCTCCTGTCCAGAA
GCCCAAGGTGGAGGAACACAAAGGTGCAGATTATGAAGACGACGACATTAACCTGTTTGGCAGTGGTGAAGAAGACGAAG
AAGCAAAGTGCATTCAAGCAAAGCGTGTGAAGAAACACTCCCAGAGAAAA
ORF - retro_drer_26 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
83.33 % |
Parental protein coverage: |
61.22 % |
Number of stop codons detected: |
2 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | MSGLQGLAQENIWFDKSRYDEAERCFYEGANGIPQTSQSQNASKSEDQSELVSRLKSLELDNKNLHRVVD |
| MSGLQGLAQENI.FDKSRY.EAERCFYEGANGIPQTSQSQNASKS.D.SEL.SRLKSLELDNKN.H.VVD |
Retrocopy | MSGLQGLAQENI*FDKSRYNEAERCFYEGANGIPQTSQSQNASKS*DKSELPSRLKSLELDNKNQHKVVD |
|
Parental | DLRATLSKLESRMVTLEKTQAPATKGVTVTKAAPVQKPKVEEHNGADDEDDDIDLFGSDEEDEEAERIKA |
| ..RATL.K.E.RM.TL..TQAPATKGVTVTKAAPVQKPKVEEH.GAD.EDDDI.LFGS.EEDEEA..I.A |
Retrocopy | EMRATLFKVEFRMATLKNTQAPATKGVTVTKAAPVQKPKVEEHKGADYEDDDINLFGSGEEDEEAKCIQA |
|
Parental | ERVKEYSQRK |
| .RVK..SQRK |
Retrocopy | KRVKKHSQRK |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Danio rerio was not studied using RNA-Seq expression data.
Danio rerio was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_drer_26 retrocopy.
Danio rerio was not studied using FANTOM5 data.
retro_drer_26 was not experimentally validated.
Retrocopy orthology:
Retrocopy retro_drer_26 has 0 orthologous retrocopies within teleost group .
Parental genes homology:
Parental genes homology involve
2 parental genes, and
5 retrocopies.