Parental gene:

PA2G4, ENSMMUG00000002164

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:53160974..53170416(+)


>ENSMMUG00000002164
ATGTCGGGCGAGGACGAGCAGCAGGAGCAAACTATCGCCGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCGGGTGTGTCAGTACTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATCGCTAATGTAGCACATACTTTTGTGGTTGGTGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTTGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGCTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTTGAACCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 65 .44 RPM
SRP007412_brain_prefrontal_cortex 56 .80 RPM
SRP007412_cerebellum 57 .67 RPM
SRP007412_heart 59 .95 RPM
SRP007412_kidney 54 .22 RPM
SRP007412_liver 35 .70 RPM
SRP007412_testis 155 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007181 ortholog_one2many 2 retrogenes
retro_chof_1089, retro_chof_1847,
Homo sapiens ENSG00000170515 possible_ortholog 6 retrogenes
retro_hsap_1930, retro_hsap_2413, retro_hsap_2868, retro_hsap_3646, retro_hsap_4191, retro_hsap_4895,
Mus musculus ENSMUSG00000025364 ortholog_one2one 1 retrogene
retro_mmus_2803,
Nomascus leucogenys ENSNLEG00000017544 possible_ortholog 6 retrogenes
retro_nleu_1212, retro_nleu_1260, retro_nleu_163, retro_nleu_3024, retro_nleu_506, retro_nleu_612,
Oryctolagus cuniculus ENSOCUG00000017342 ortholog_one2one 1 retrogene
retro_ocun_1733,
Pongo abelii ENSPPYG00000025851 possible_ortholog 7 retrogenes
retro_pabe_1595, retro_pabe_1778, retro_pabe_2375, retro_pabe_2869, retro_pabe_2993, retro_pabe_3430, retro_pabe_3807,
Sus scrofa ENSSSCG00000000377 ortholog_one2one 1 retrogene
retro_sscr_338,
Sus scrofa ENSSSCG00000022666 possible_ortholog 2 retrogenes
retro_sscr_1143, retro_sscr_337,
Tarsius syrichta ENSTSYG00000006777 ortholog_one2one 1 retrogene
retro_tsyr_746,
Vicugna pacos ENSVPAG00000009523 possible_ortholog 1 retrogene
retro_vpac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1168 88.81 74.37
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2. retro_mmul_2631 81.92 92.13
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Download FASTA sequences of all ENSMMUG00000002164 retrocopies