Parental gene: | mml-mir-762-3, ENSMMUG00000003225 |
| Aliases: | None |
| Description: | mml-mir-762-1 [Source:miRBase;Acc:MI0012548] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 20:28913286..28978183(-) |
>ENSMMUG00000003225
ATGGCCGGCCGGACCGTACGGGCCGAGACCCGGAGCCGGGCCAAGGATGACATCAAGAAGGTGATGGCGACCATCGAGAA
GGTCCGGAGATGGGAGAAGCGATGGGTGACTGTGGGCGACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGTGGACC
CCCAGGAGGAGGAGCGAAGGCGGGCAGGTGGCGGGGCAGAGAGATCCCGTGGCCGGGAACGTCGGGGCAGGGGCGCCAGT
CCCCGAGGGGGTGGCCCTCTCATCCTGCTGGATCTCAATGATGAGAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCT
GCAAAAGGGCACAGAGCCCAGTCCTGGGGGCACCCCCCAGCCCAGCCGCCCTGTGTCACCTGCCGGACCCCCAGAAGGGG
TCCCTGAGGAGGCTCAGCCCCCACGGCTGGGCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCC
CCAATGCTGACCAAGGAGGAACCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGTGAGAATGACGAGGAGAGCCCT
CCACGAGAAGGGGCTGAAGACAGAGCCCCTAAGGAGGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGCCCGGCCCAGTT
CCACAGCGGTGCCGGACACCAGAGCTCCCGGGGGAGGCAGCAAGGCCCCGAGAGCACCCAGGACGATCCCCCAGGGTAAG
GGGAGGTGA
ATGGCCGGCCGGACCGTACGGGCCGAGACCCGGAGCCGGGCCAAGGATGACATCAAGAAGGTGATGGCGACCATCGAGAA
GGTCCGGAGATGGGAGAAGCGATGGGTGACTGTGGGCGACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGTGGACC
CCCAGGAGGAGGAGCGAAGGCGGGCAGGTGGCGGGGCAGAGAGATCCCGTGGCCGGGAACGTCGGGGCAGGGGCGCCAGT
CCCCGAGGGGGTGGCCCTCTCATCCTGCTGGATCTCAATGATGAGAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCT
GCAAAAGGGCACAGAGCCCAGTCCTGGGGGCACCCCCCAGCCCAGCCGCCCTGTGTCACCTGCCGGACCCCCAGAAGGGG
TCCCTGAGGAGGCTCAGCCCCCACGGCTGGGCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCC
CCAATGCTGACCAAGGAGGAACCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGTGAGAATGACGAGGAGAGCCCT
CCACGAGAAGGGGCTGAAGACAGAGCCCCTAAGGAGGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGCCCGGCCCAGTT
CCACAGCGGTGCCGGACACCAGAGCTCCCGGGGGAGGCAGCAAGGCCCCGAGAGCACCCAGGACGATCCCCCAGGGTAAG
GGGAGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .84 RPM |
| SRP007412_brain | 2 .47 RPM |
| SRP007412_cerebellum | 2 .26 RPM |
| SRP007412_heart | 9 .13 RPM |
| SRP007412_kidney | 7 .28 RPM |
| SRP007412_liver | 5 .11 RPM |
| SRP007412_testis | 30 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007604 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008412 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016715 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000001676 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000000482 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000029090 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011988 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_390 | 90.91 | 75.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_724 | 90.12 | 74.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_740 | 87.20 | 75.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_750 | 88.28 | 66.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_755 | 87.04 | 74.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_791 | 89.54 | 63.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmul_975 | 89.63 | 75.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmul_1247 | 90.85 | 67.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmul_1613 | 89.02 | 67.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmul_1818 | 89.09 | 67.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmul_2108 | 88.41 | 67.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mmul_2153 | 90.24 | 67.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_mmul_2644 | 92.07 | 67.36 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003225 retrocopies