Parental gene:

MMU.4849, ENSMMUG00000009590

Aliases:EIF4A3, DDX48
Description:eukaryotic initiation factor 4A-III [Source:RefSeq peptide;Acc:NP_001253345]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:75579803..75594423(-)


>ENSMMUG00000009590
ATGGCGACCACGGCCACGATGGCGACCTCGGGCTCGGCGCGAAAGCGTCTGCTCAAAGAGGAAGACATGACCAAAGTGGA
ATTCGAGACCAGCGAGGAGGTGGATGTGACCCCCACGTTCGACACCATGGGCCTGCGGGAGGACCTACTGCGGGGCATCT
ACGCTTACGGTTTTGAAAAACCATCAGCAATCCAGCAACGAGCAATCAAGCAGATCATCAAAGGGAGAGATGTCATCGCG
CAGTCTCAGTCCGGCACAGGCAAAACAGCCACCTTCAGTATCTCAGTCCTCCAGTGTTTGGATATTCAGGTTCGTGAAAC
TCAAGCTTTGATCTTGGCTCCCACGAGAGAGTTAGCTGTGCAGATTCAGAAGGGGCTGCTCGCTCTCGGCGACTACATGA
ATGTCCAGTGCCATGCCTGCATTGGAGGCACCAATGTTGGGGAGGACATCAGGAAGCTGGATTATGGACAGCATGTTGTC
GCGGGCACTCCAGGGCGTGTTTTTGATATGATTCGTCGCAGAAGCTTAAGGACACGTGCTATCAAAATGTTGGTTTTGGA
TGAAGCTGATGAAATGTTGAATAAAGGTTTCAAAGAGCAGATCTATGACGTGTACAGGTACCTGCCTCCAGCCACACAGG
TGGTGCTCATCAGTGCCACGCTGCCACACGAGATTCTGGAGATGACCAACAAGTTCATGACCGACCCAATCCGCATCTTG
GTGAAACGTGATGAATTGACTCTGGAAGGCATCAAGCAATTTTTTGTGGCAGTGGAGAGGGAAGAGTGGAAATTTGACAC
TCTGTGTGACCTCTACGACACACTGACCATCACTCAGGCGGTCATCTTCTGCAACACCAAAAGAAAGGTGGACTGGCTGA
CAGAAAAAATGAGAGAAGCCAACTTCACTGTGTCCTCAATGCACGGAGACATGCCCCAGAAAGAGCGGGAGTCCATCATG
AAGGAGTTCCGGTCGGGCGCCAGCCGAGTGCTTATTTCTACAGACGTCTGGGCCAGGGGGTTGGATGTCCCTCAGGTGTC
CCTCATCATCAACTATGATCTCCCCAATAACAGAGAATTGTACATACACAGAATCGGGAGATCAGGTCGATACGGCCGGA
AGGGGGTCGCCATTAACTTTGTGAAGAACGATGACATCCGCATCCTCAGAGATATCGAGCAGTACTATTCCACTCAGATC
GATGAGATGCCTATGAACGTTGCTGATCTGATCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .99 RPM
SRP007412_brain 19 .61 RPM
SRP007412_cerebellum 22 .67 RPM
SRP007412_heart 21 .32 RPM
SRP007412_kidney 31 .69 RPM
SRP007412_liver 25 .18 RPM
SRP007412_testis 54 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000009136 possible_ortholog 2 retrogenes
retro_mmur_444, retro_mmur_50,
Myotis lucifugus ENSMLUG00000009585 ortholog_one2many 1 retrogene
retro_mluc_65,
Macaca mulatta ENSMMUG00000003702 within_species_paralog 2 retrogenes
retro_mmul_1055, retro_mmul_2450,
Macaca mulatta ENSMMUG00000013499 within_species_paralog 1 retrogene
retro_mmul_1280,
Monodelphis domestica ENSMODG00000002190 ortholog_one2one 1 retrogene
retro_mdom_202,
Ornithorhynchus anatinus ENSOANG00000000334 ortholog_one2one 1 retrogene
retro_oana_47,
Otolemur garnettii ENSOGAG00000007495 ortholog_one2one 1 retrogene
retro_ogar_212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_851 95.51 59.61
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Download FASTA sequences of all ENSMMUG00000009590 retrocopies