Parental gene: | MMU.1802, ENSMMUG00000009693 |
| Aliases: | None |
| Description: | succinyl-CoA ligase [Source:RefSeq peptide;Acc:NP_001248050] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 2:68525685..68800895(+) |
>ENSMMUG00000009693
ATGGCGTCCCCCGTGGCAACGCAGGCCGGGAAGCTTCTGCGAGCCCTAGCACTGCGTCCCCGCTTCCTGGCGGTCGGGTC
CCAGGCAGCTCAATTAACCTCCAGAAGATGGCTGAACCTGCAGGAATACCAGAGCAAGAAACTGATGTCTGACAACGGAG
TGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCGAATGAAGCTCTTGAGGCTGCTAAGAGACTAAATGCAAAAGAAATT
GTTTTAAAAGCCCAGATCTTAGCTGGAGGAAGAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAAC
AAAAGACCCAAATGTTGTGGGACAGCTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAG
GTGTGAAAGTTAACAAGGTGATGGTTGCTGAAGCCTTGGACATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGG
TCCTGCAATGGCCCCGTGCTGGTGGGCAGCCCTCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCAGAGCT
CATTTTTAAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCAGAAAATCTAGGCTTCG
TTGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTAAAAATTGATGCTACTCAGGTG
GAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTCGATGACAACGCAGA
ATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCCGAGAATGAGCCCATTGAAAACGAAGCTGCCAAATATGATC
TAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTAGCCATGGCTACTTGTGATATCATT
TTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGCGTAAAGGAAGCTCAAGTATATCAAGCATTCAA
ATTGCTCACAGCTGATCCTAAGGTTGAAGCCATCCTTGTCAATATTTTTGGTGGTATCGTCAACTGTGCCATCATTGCCA
ATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGAG
GCCCAGAAGATACTCAGCAACAGCGGACTCCCCATTACTTCAGCCGTTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGC
CAGTGTGGCCAAGAAGTGA
ATGGCGTCCCCCGTGGCAACGCAGGCCGGGAAGCTTCTGCGAGCCCTAGCACTGCGTCCCCGCTTCCTGGCGGTCGGGTC
CCAGGCAGCTCAATTAACCTCCAGAAGATGGCTGAACCTGCAGGAATACCAGAGCAAGAAACTGATGTCTGACAACGGAG
TGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCGAATGAAGCTCTTGAGGCTGCTAAGAGACTAAATGCAAAAGAAATT
GTTTTAAAAGCCCAGATCTTAGCTGGAGGAAGAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAAC
AAAAGACCCAAATGTTGTGGGACAGCTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAG
GTGTGAAAGTTAACAAGGTGATGGTTGCTGAAGCCTTGGACATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGG
TCCTGCAATGGCCCCGTGCTGGTGGGCAGCCCTCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCAGAGCT
CATTTTTAAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCAGAAAATCTAGGCTTCG
TTGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTAAAAATTGATGCTACTCAGGTG
GAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTCGATGACAACGCAGA
ATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCCGAGAATGAGCCCATTGAAAACGAAGCTGCCAAATATGATC
TAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTAGCCATGGCTACTTGTGATATCATT
TTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGCGTAAAGGAAGCTCAAGTATATCAAGCATTCAA
ATTGCTCACAGCTGATCCTAAGGTTGAAGCCATCCTTGTCAATATTTTTGGTGGTATCGTCAACTGTGCCATCATTGCCA
ATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGAG
GCCCAGAAGATACTCAGCAACAGCGGACTCCCCATTACTTCAGCCGTTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGC
CAGTGTGGCCAAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .49 RPM |
| SRP007412_brain | 11 .32 RPM |
| SRP007412_cerebellum | 8 .33 RPM |
| SRP007412_heart | 72 .43 RPM |
| SRP007412_kidney | 181 .10 RPM |
| SRP007412_liver | 111 .31 RPM |
| SRP007412_testis | 12 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000172340 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027438 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017294 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007539 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000061838 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007553 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006190 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013735 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004554 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1273 | 56.42 | 59.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1995 | 57.59 | 59.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000009693 retrocopies