Parental gene:

MMU.1802, ENSMMUG00000009693

Aliases:None
Description:succinyl-CoA ligase [Source:RefSeq peptide;Acc:NP_001248050]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:68525685..68800895(+)


>ENSMMUG00000009693
ATGGCGTCCCCCGTGGCAACGCAGGCCGGGAAGCTTCTGCGAGCCCTAGCACTGCGTCCCCGCTTCCTGGCGGTCGGGTC
CCAGGCAGCTCAATTAACCTCCAGAAGATGGCTGAACCTGCAGGAATACCAGAGCAAGAAACTGATGTCTGACAACGGAG
TGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCGAATGAAGCTCTTGAGGCTGCTAAGAGACTAAATGCAAAAGAAATT
GTTTTAAAAGCCCAGATCTTAGCTGGAGGAAGAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAAC
AAAAGACCCAAATGTTGTGGGACAGCTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAG
GTGTGAAAGTTAACAAGGTGATGGTTGCTGAAGCCTTGGACATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGG
TCCTGCAATGGCCCCGTGCTGGTGGGCAGCCCTCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCAGAGCT
CATTTTTAAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCAGAAAATCTAGGCTTCG
TTGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTAAAAATTGATGCTACTCAGGTG
GAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTCGATGACAACGCAGA
ATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCCGAGAATGAGCCCATTGAAAACGAAGCTGCCAAATATGATC
TAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTAGCCATGGCTACTTGTGATATCATT
TTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGCGTAAAGGAAGCTCAAGTATATCAAGCATTCAA
ATTGCTCACAGCTGATCCTAAGGTTGAAGCCATCCTTGTCAATATTTTTGGTGGTATCGTCAACTGTGCCATCATTGCCA
ATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGAG
GCCCAGAAGATACTCAGCAACAGCGGACTCCCCATTACTTCAGCCGTTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGC
CAGTGTGGCCAAGAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 11 .32 RPM
SRP007412_brain_prefrontal_cortex 8 .49 RPM
SRP007412_cerebellum 8 .33 RPM
SRP007412_heart 72 .43 RPM
SRP007412_kidney 181 .10 RPM
SRP007412_liver 111 .31 RPM
SRP007412_testis 12 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000172340 ortholog_one2many 1 retrogene
retro_hsap_1044,
Gorilla gorilla ENSGGOG00000027438 ortholog_one2many 1 retrogene
retro_ggor_825,
Myotis lucifugus ENSMLUG00000017294 ortholog_one2many 1 retrogene
retro_mluc_695,
Macaca mulatta ENSMMUG00000007539 within_species_paralog 1 retrogene
retro_mmul_1231,
Mus musculus ENSMUSG00000061838 ortholog_one2many 1 retrogene
retro_mmus_3720,
Nomascus leucogenys ENSNLEG00000007553 ortholog_one2many 1 retrogene
retro_nleu_915,
Otolemur garnettii ENSOGAG00000006190 possible_ortholog 1 retrogene
retro_ogar_161,
Pongo abelii ENSPPYG00000013735 ortholog_one2many 1 retrogene
retro_pabe_2624,
Pteropus vampyrus ENSPVAG00000004554 ortholog_one2many 1 retrogene
retro_pvam_912,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1273 56.42 59.26
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2. retro_mmul_1995 57.59 59.26
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Download FASTA sequences of all ENSMMUG00000009693 retrocopies