Parental gene:

SUCLG2, ENSG00000172340

Aliases:SUCLG2, GBETA
Description:succinate-CoA ligase, GDP-forming, beta subunit [Source:HGNC Symbol;Acc:11450]
Organism:Human (Homo sapiens)
Coordinates:3:67410883..67705038(-)


>ENSG00000172340
ATGGCGTCCCCCGTAGCAGCGCAGGCCGGGAAGCTTCTGCGAGCCCTAGCGCTGCGGCCCCGCTTCCTGGCGGCCGGGTC
CCAGGCAGTTCAATTAACCTCCAGAAGATGGCTGAACCTGCAGGAATACCAGAGCAAGAAACTGATGTCTGACAACGGAG
TGAGAGTTCAAAGATTCTTTGTAGCAGACACTGCAAATGAAGCTCTCGAGGCTGCTAAGAGACTAAATGCAAAAGAAATT
GTTTTAAAAGCCCAGATCTTAGCTGGAGGAAGAGGAAAAGGTGTCTTCAATAGTGGTTTGAAAGGAGGTGTTCATTTAAC
AAAAGACCCTAATGTTGTGGGACAGCTGGCTAAACAGATGATTGGGTACAATCTAGCGACAAAACAAACTCCAAAAGAAG
GTGTGAAAGTTAACAAGGTGATGGTTGCTGAAGCCTTGGATATTTCCAGAGAAACCTACCTGGCAATTCTGATGGACCGG
TCCTGCAATGGCCCCGTGCTGGTGGGCAGCCCCCAGGGGGGCGTCGACATTGAAGAGGTGGCTGCTTCAAACCCGGAGCT
CATTTTTAAGGAGCAAATTGACATTTTTGAAGGAATAAAGGACAGCCAAGCTCAGCGGATGGCCGAAAATCTAGGCTTCG
TTGGGCCTTTGAAAAGCCAGGCTGCAGATCAAATTACGAAGCTGTATAATCTCTTCCTGAAAATTGATGCTACTCAGGTG
GAAGTGAATCCCTTTGGTGAAACTCCAGAAGGACAAGTTGTCTGTTTTGATGCCAAGATAAACTTTGATGACAACGCAGA
ATTCCGACAAAAAGACATATTTGCTATGGACGACAAATCAGAGAATGAGCCCATTGAAAATGAAGCTGCCAAATATGATC
TAAAATACATAGGACTAGATGGGAACATTGCCTGCTTTGTGAATGGTGCTGGGCTCGCCATGGCTACTTGTGATATCATT
TTCCTTAATGGTGGGAAGCCAGCCAACTTCTTGGATCTTGGAGGTGGTGTAAAGGAAGCTCAAGTATATCAAGCATTCAA
ATTGCTCACAGCTGATCCTAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGCCATCATTGCCA
ATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAAA
AAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCA
CCAAAATCTGAGTAAGTGTGCCATCAGCATTTTTTTATGTTAA

Library Parental gene expression (RPM)
bodymap2_liver 164 .62 RPM
bodymap2_lung 60 .37 RPM
bodymap2_breast 79 .09 RPM
bodymap2_adipose 69 .59 RPM
bodymap2_adrenal 54 .71 RPM
bodymap2_skeletal_muscle 120 .69 RPM
bodymap2_thyroid 76 .19 RPM
bodymap2_prostate 93 .41 RPM
bodymap2_colon 123 .83 RPM
bodymap2_testis 45 .70 RPM
bodymap2_brain 27 .12 RPM
bodymap2_heart 89 .92 RPM
bodymap2_white_blood_cells 66 .84 RPM
bodymap2_lymph_node 43 .25 RPM
bodymap2_ovary 68 .66 RPM
bodymap2_kidney 132 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000136143 within_species_paralog 3 retrogenes
retro_hsap_2236, retro_hsap_2281, retro_hsap_3445,
Gorilla gorilla ENSGGOG00000027438 ortholog_one2one 1 retrogene
retro_ggor_825,
Myotis lucifugus ENSMLUG00000017294 ortholog_one2one 1 retrogene
retro_mluc_695,
Macaca mulatta ENSMMUG00000009693 ortholog_one2many 2 retrogenes
retro_mmul_1273, retro_mmul_1995,
Mus musculus ENSMUSG00000061838 ortholog_one2one 1 retrogene
retro_mmus_3720,
Nomascus leucogenys ENSNLEG00000007553 ortholog_one2one 1 retrogene
retro_nleu_915,
Otolemur garnettii ENSOGAG00000006190 ortholog_one2many 1 retrogene
retro_ogar_161,
Pongo abelii ENSPPYG00000013735 ortholog_one2one 1 retrogene
retro_pabe_2624,
Pteropus vampyrus ENSPVAG00000004554 ortholog_one2one 1 retrogene
retro_pvam_912,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1044 89.81 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000172340 retrocopies