Parental gene:

MMU.4793, ENSMMUG00000014761

Aliases:RAB5C, RAB5L
Description:ras-related protein Rab-5C [Source:RefSeq peptide;Acc:NP_001253100]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:52232549..52263359(-)


>ENSMMUG00000014761
ATGGCGGGTCGGGGAGGCGCAGCACGACCCAATGGACCAGCCGCTGGGAACAAGATCTGTCAGTTTAAACTGGTTCTGCT
GGGGGAGTCTGCGGTGGGCAAATCCAGCCTCGTCCTCCGCTTTGTCAAGGGACAGTTTCACGAGTACCAGGAGAGCACAA
TCGGAGCGGCCTTCCTCACACAGACTGTCTGCCTGGATGACACAACAGTCAAGTTTGAGATCTGGGACACAGCTGGACAG
GAGCGGTATCACAGCCTGGCCCCCATGTACTATCGGGGGGCTCAGGCTGCCATCGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCCAAGAACTGGGTGAAGGAGCTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTCGCGGGTA
ACAAGGCAGACCTGGCCAGCAAGAGAGCCGTGGAATTCCAGGAAGCACAAGCCTATGCAGATGACAACAGTTTGCTGTTC
ATGGAGACATCAGCAAAGACTGCAATGAACGTGAACGAAATCTTCATGGCAATAGCTAAGAAGCTTCCCAAGAACGAGCC
CCAGAATGCAACTGGTGCTCCAGGCCGAAACCGAGGTGTGGACCTCCAGGAGAACAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 108 .84 RPM
SRP007412_brain 47 .96 RPM
SRP007412_cerebellum 40 .10 RPM
SRP007412_heart 32 .80 RPM
SRP007412_kidney 101 .76 RPM
SRP007412_liver 80 .00 RPM
SRP007412_testis 43 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000472 possible_ortholog 2 retrogenes
retro_cjac_189, retro_cjac_1948,
Gorilla gorilla ENSGGOG00000005472 ortholog_one2one 1 retrogene
retro_ggor_2182,
Macropus eugenii ENSMEUG00000005614 ortholog_one2one 1 retrogene
retro_meug_2118,
Macaca mulatta ENSMMUG00000005692 within_species_paralog 1 retrogene
retro_mmul_1557,
Macaca mulatta ENSMMUG00000006992 within_species_paralog 2 retrogenes
retro_mmul_227, retro_mmul_839,
Monodelphis domestica ENSMODG00000014792 ortholog_one2one 1 retrogene
retro_mdom_1399,
Pongo abelii ENSPPYG00000008398 ortholog_one2one 1 retrogene
retro_pabe_2664,
Pan troglodytes ENSPTRG00000009194 ortholog_one2one 1 retrogene
retro_ptro_2237,
Tupaia belangeri ENSTBEG00000007092 ortholog_one2one 1 retrogene
retro_tbel_4668,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2022 80.95 86.57
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Download FASTA sequences of all ENSMMUG00000014761 retrocopies