Parental gene: | CCDC90B, ENSMMUG00000020154 |
| Aliases: | None |
| Description: | coiled-coil domain-containing protein 90B, mitochondrial [Source:RefSeq peptide;Acc:NP_001247740] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 14:81530462..81553403(-) |
>ENSMMUG00000020154
ATGAATAGTCGCCAGGCTTGGCGGCTCTTGCTCTCCCAAGGCAGAGGGGATCGTTGGGTTTCAAGCCCCCGCGGGCATTT
CTCGCCGGCCCTGCGGAGAGACTTCTTCACCACCACAACCAAGGAGGGATATGATAGGCGGCCAGTGGATATAACTCCTT
TAGAACAAAGGAAATTAACTTTTGATACCCATGCATTGGTTCAGGACTTGGAAACTCATGGATTTGACAAAACACAAGCA
GAAACAATTGTATCAGCATTAACTACTTTATCAAATGTCAGCCTGGATACTATCTATAAAGAGATGGTCACTCAAGCTCA
ACAGGAAATAACAGTACAACAGCTAATGGCTCATTTGGATTCTATCAGGAAAGACATGGTCATCCTAGAGAAAAGTGAAT
TCGCAAATCTGAGAGCAGAGAATGAGAAAATGAAAATTGAATTAGACCAAGTTAAGCAACAACTAATGCATGAAACCAGT
CGAATCAGAGCAGATAATAAACTGGATATCAACCTAGAAAGGAGCAGAGTAACAGATATGTTTACAGATCAAGAAAAGCA
ACTTATGGAAACAACTACAGAATTTACAAAAAAGGATACTCAAACCAAAAGTATTATTTCAGAGACCAGTAATAAAATTG
ACGCTGAAATTGCTTCCTTGAAAACACTGATGGAGTCTAACAAACTTGAGACAATTCGTTATCTTGCAGCTTCGGTGTTT
ACTTGCCTGGCAATAGCATTGGGATTTTATAGATTCTGGAAGTAG
ATGAATAGTCGCCAGGCTTGGCGGCTCTTGCTCTCCCAAGGCAGAGGGGATCGTTGGGTTTCAAGCCCCCGCGGGCATTT
CTCGCCGGCCCTGCGGAGAGACTTCTTCACCACCACAACCAAGGAGGGATATGATAGGCGGCCAGTGGATATAACTCCTT
TAGAACAAAGGAAATTAACTTTTGATACCCATGCATTGGTTCAGGACTTGGAAACTCATGGATTTGACAAAACACAAGCA
GAAACAATTGTATCAGCATTAACTACTTTATCAAATGTCAGCCTGGATACTATCTATAAAGAGATGGTCACTCAAGCTCA
ACAGGAAATAACAGTACAACAGCTAATGGCTCATTTGGATTCTATCAGGAAAGACATGGTCATCCTAGAGAAAAGTGAAT
TCGCAAATCTGAGAGCAGAGAATGAGAAAATGAAAATTGAATTAGACCAAGTTAAGCAACAACTAATGCATGAAACCAGT
CGAATCAGAGCAGATAATAAACTGGATATCAACCTAGAAAGGAGCAGAGTAACAGATATGTTTACAGATCAAGAAAAGCA
ACTTATGGAAACAACTACAGAATTTACAAAAAAGGATACTCAAACCAAAAGTATTATTTCAGAGACCAGTAATAAAATTG
ACGCTGAAATTGCTTCCTTGAAAACACTGATGGAGTCTAACAAACTTGAGACAATTCGTTATCTTGCAGCTTCGGTGTTT
ACTTGCCTGGCAATAGCATTGGGATTTTATAGATTCTGGAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .42 RPM |
| SRP007412_brain | 15 .91 RPM |
| SRP007412_cerebellum | 18 .02 RPM |
| SRP007412_heart | 8 .60 RPM |
| SRP007412_kidney | 10 .09 RPM |
| SRP007412_liver | 5 .34 RPM |
| SRP007412_testis | 24 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010541 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014547 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000137500 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016478 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000004144 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003736 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004129 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005459 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009462 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014665 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011196 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003998 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007753 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_773 | 82.22 | 88.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1880 | 80.99 | 55.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000020154 retrocopies