Parental gene:

MMU.1643, ENSMMUG00000020474

Aliases:None
Description:DNA-directed RNA polymerase II subunit RPB3 [Source:RefSeq peptide;Acc:NP_001245048]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:55809847..55819349(+)


>ENSMMUG00000020474
ATGCCGTACGCCAACCAGCCCACCGTGCGGATCACTGAGCTCACTGACGAGAATGTGAAGTTCATCATCGAGAACACCGA
CCTGGCGGTGGCCAATTCGATTCGGAGGGTCTTCATCGCTGAGGTGCCCATAATAGCCATTGACTGGGTTCAGATTGATG
CCAATTCCTCAGTCCTTCATGATGAGTTCATCGCTCACAGGCTTGGATTAATTCCCCTCATTAGTGATGACATTGTGGAC
AAGCTGCAGTACTCCCGGGACTGCACATGTGAGGAGTTCTGCCCCGAGTGCTCAGTGGAGTTCACCCTCGACGTGCGGTG
CAATGAAGACCAGACGCGACATGTCACCTCTCGAGACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTGACATCCCGGA
ACCGAGATAATGACCCCAATGACTACGTGGAGCAGGATGACATCCTCATCGTCAAGTTGAGAAAGGGCCAGGAGCTGAGA
CTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCCTACTGCAGGGGTGGCTTTTGAATACGA
TCCAGACAATGCCCTGAGGCACACAGTGTACCCCAAGCCTGAGGAATGGCCAAAGAGTGAGTACTCAGAGCTGGATGAGG
ATGAGTCGCAGGCTCCCTATGACCCCAACGGCAAGCCAGAAAGGTTTTACTACAACGTGGAGTCCTGTGGCTCTCTGCGT
CCTGAAACCATTGTCCTGTCAGCCCTCTCTGGATTGAAGAAGAAACTGAGTGATTTACAAACTCAATTAAGCCACGAGAT
CCAGAGTGATGTGCTAACCATAAATTAA

Library Parental gene expression (RPM)
SRP007412_brain 44 .15 RPM
SRP007412_brain_prefrontal_cortex 52 .91 RPM
SRP007412_cerebellum 41 .91 RPM
SRP007412_heart 29 .44 RPM
SRP007412_kidney 50 .59 RPM
SRP007412_liver 35 .19 RPM
SRP007412_testis 30 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008720 ortholog_one2one 1 retrogene
retro_cfam_688,
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Homo sapiens ENSG00000102978 ortholog_one2one 1 retrogene
retro_hsap_2496,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Mus musculus ENSMUSG00000031783 ortholog_one2one 1 retrogene
retro_mmus_1723,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pongo abelii ENSPPYG00000007390 ortholog_one2one 1 retrogene
retro_pabe_1839,
Pan troglodytes ENSPTRG00000008157 ortholog_one2one 1 retrogene
retro_ptro_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1674 74.70 60.00
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Download FASTA sequences of all ENSMMUG00000020474 retrocopies