Parental gene:

CCT5, ENSMODG00000002356

Aliases:None
Description:chaperonin containing TCP1, subunit 5 (epsilon) [Source:HGNC Symbol;Acc:1618]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:106184457..106205705(+)


>ENSMODG00000002356
ATGTCTTCCATGGGGACTCTGGCATTTGACGAATATGGCCGTCCTTTCCTCATCATCAAGGACCAAGAGCGCAAGTCTCG
TCTTATGGGACTGGAGGCACTCAAGTCTCACATAATGGCGGCTAAGGCTGTATCAAATACAATGAGAACATCACTTGGAC
CTAATGGGCTTGATAAAATGATGGTGGATAAGGATGGTGATGTGACTGTAACCAATGATGGTGCCACCATTTTAAGCATG
ATGGATGTAGATCATCAGATTGCTAAACTGATGGTTGAACTTTCCAAATCACAGGATGATGAGATTGGAGATGGGACTAC
AGGAGTAGTTGTTTTGGCTGGTGCTTTGTTGGAAGAAGCTGAACAACTGCTGGATCGTGGTATTCACCCAATCAGAATAG
CAGATGGTTATGAGCAGGCTGCTCGCATTGCCATTGAACATTTGGACAAAATCAGTGAAAGTTTTCCAGTTGATGTTGGA
AACACTGAACCCCTCATCCAGACTGCAAAAACAACTCTTGGTTCTAAAGTAGTTAACAGCTGCCACCAACAAATGGCTGA
GATTGCTGTAAATGCTGTCCTGACGGTAGCAGATATGGAACGAAGAGATGTTGACTTTGAGCTAATCAAAGTAGAAGGCA
AAGTAGGAGGAAGACTTGAAGATACTCAGCTCATTAAGGGAGTAATTGTGGATAAGGATTTTAGTCATCCACAAATGCCT
AAAGAAGTGAAAAATGCTAGGATTGCAATTCTTACTTGTCCATTTGAGCCACCTAAACCAAAAACTAAACATAAGCTTGA
TGTTACTTCTGTAGAAGATTACAGAGCCCTACAGAAATATGAAAAGGAGAAGTTTGAAGAGATGATTGAACAAATTAAAC
TCACTGGTGCAAACCTAGCTATTTGCCAGTGGGGCTTTGATGATGAAGCAAATCATTTACTCCTTCAGAATAAGTTACCT
GCTGTCCGTTGGGTAGGGGGACCGGAAATTGAACTGATTGCCATTGCAACGGGAGGGCGCATTGTTCCACGGTTCTCTGA
ACTTACATCTGAGAAACTTGGTTTTGCTGGTCTTGTGAAAGAGATTTCTTTTGGCACAACAAAAGACAAAATGCTTGTTA
TAGAGAAATGTCGGAACTCCAGGGCTGTGACCATATTCATTAGAGGAGGAAATAAAATGATCATTGAAGAAGCAAAACGA
TCTCTTCATGATGCTCTTTGTGTGATCAGAAACCTAGTTCGTGATAATCGTGTGGTATATGGAGGTGGTGCAGCTGAAAT
ATCTTGTGCTTTGGCAGTTAGTGAAGAAGCTGATAAGTGTCCTTCTTTGGAGCAATATGCTATGAGAGCTTTTGCAGATG
CATTAGAGGTCATTCCCATGGCCCTTTCTGAAAATAGTGGTATGAATCCCATCCAAACTATGACTGATGTACGGGCCAGA
CAAGTGAAAGAAATGAATCCTGCCCTTGGCATTGACTGCTTGCATAAGGGTACAAATGATATGAGACAACAACATGTGAT
AGAAACTTTGATTGGCAAAAAGCAACAGATTTCTCTTGCAACACAAATGGTCAGGATGATTCTGAAGATTGATGATATTC
GCAAACCAGGAGAATCTGAAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017889 ortholog_one2one 1 retrogene
retro_btau_1432,
Callithrix jacchus ENSCJAG00000008977 ortholog_one2many 1 retrogene
retro_cjac_516,
Homo sapiens ENSG00000150753 ortholog_one2one 2 retrogenes
retro_hsap_1219, retro_hsap_3230,
Gorilla gorilla ENSGGOG00000024064 ortholog_one2many 1 retrogene
retro_ggor_2197,
Myotis lucifugus ENSMLUG00000007977 ortholog_one2one 1 retrogene
retro_mluc_1735,
Macaca mulatta ENSMMUG00000020112 ortholog_one2one 2 retrogenes
retro_mmul_1294, retro_mmul_2033,
Pongo abelii ENSPPYG00000015342 ortholog_one2one 2 retrogenes
retro_pabe_1012, retro_pabe_2678,
Pan troglodytes ENSPTRG00000016725 ortholog_one2one 2 retrogenes
retro_ptro_2182, retro_ptro_834,
Tupaia belangeri ENSTBEG00000001201 ortholog_one2one 2 retrogenes
retro_tbel_1618, retro_tbel_4389,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_861 95.57 100.00
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Download FASTA sequences of all ENSMODG00000002356 retrocopies