Parental gene:

AP1S3, ENSMODG00000021198

Aliases:None
Description:adaptor-related protein complex 1, sigma 3 subunit [Source:HGNC Symbol;Acc:18971]
Organism:Opossum (Monodelphis domestica)
Coordinates:7:225725689..225808860(+)


>ENSMODG00000021198
ATGCAGCCAGGGAATCCCCCTCCGTTCTCTCAGCCTGGGTCCCCAGGAAGCCAAAGGGGGCCGTCTCTTTCCGACTCCCA
CCTGTGGGATTCCTCCCCGGCCGTCCAGGAGTACCCCGCGAGCAGGGGCCGGCCGGCCGGGAGCCTCGGACTCCCGTCGC
CCAGCCCGTGGCTCCTGGAGGGGCGGCGGCGCGTTCCGCTTCTAGCCCGTCCGGTCCGGCAGCTCGGGCGCCCGAGCCTC
GCGAGGCGGTGGGCGGCGGCCTCGGCCCTTGCCAACATGATCCATTTTATATTGCTGTTCAGTCGACAAGGGAAATTAAG
ATTGCAGAAGTGGTATACCACACTACCTGATAAGGAGAGAAAAAAGATCATCCGAGAAATTGTACAAATGATTCTGTCTC
GTGGTCAAAGGACAAGCAGTTTTGTTGACTGGAAGGATCTAAAACTTGTTTATAAAAGATATGCTAGCTTATATTTTTGC
TGTGCAGTAGAAAATCAAGACAATGAACTGTTGACACTAGAGATTGTACATCGTTATGTGGAATTACTAGACAAGTATTT
TGGAAATGTCTGTGAGCTGGATATTATATTTAATTTTGAAAAGGCATATTTTATCCTTGATGAGTTTATCATGGGTGGAG
AAATCCAAGAAACCTCAAAGAAGTCAGCTGTCAAGGCTATTGAAGACTCTGATATGTTACAGGAGACAATGGAAGAATAC
ATGAGCAAACCTGCATTTTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011939 ortholog_one2one 5 retrogenes
retro_chof_113, retro_chof_1230, retro_chof_1299, retro_chof_1949, retro_chof_2099,
Callithrix jacchus ENSCJAG00000012352 ortholog_one2one 2 retrogenes
retro_cjac_3187, retro_cjac_3903,
Macropus eugenii ENSMEUG00000016580 ortholog_one2one 11 retrogenes
retro_meug_1074, retro_meug_1342, retro_meug_1488, retro_meug_168, retro_meug_1864, retro_meug_289, retro_meug_318, retro_meug_361, retro_meug_816, retro_meug_909, retro_meug_938,
Microcebus murinus ENSMICG00000014406 ortholog_one2one 1 retrogene
retro_mmur_1492,
Monodelphis domestica ENSMODG00000017197 within_species_paralog 7 retrogenes
retro_mdom_1189, retro_mdom_1329, retro_mdom_1441, retro_mdom_1470, retro_mdom_1616, retro_mdom_1987, retro_mdom_903,
Monodelphis domestica ENSMODG00000017579 within_species_paralog 1 retrogene
retro_mdom_1774,
Mus musculus ENSMUSG00000054702 ortholog_one2one 3 retrogenes
retro_mmus_2202, retro_mmus_2799, retro_mmus_487,
Ochotona princeps ENSOPRG00000013358 ortholog_one2one 1 retrogene
retro_opri_443,
Pan troglodytes ENSPTRG00000012979 ortholog_one2one 1 retrogene
retro_ptro_2258,
Sarcophilus harrisii ENSSHAG00000010973 ortholog_one2one 1 retrogene
retro_shar_695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1427 75.50 61.38
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Download FASTA sequences of all ENSMODG00000021198 retrocopies