Parental gene: | Rrp15, ENSMUSG00000001305 |
| Aliases: | Rrp15, 2810430M08Rik, 5430437H21Rik |
| Description: | ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:186720977..186749358(-) |
>ENSMUSG00000001305
ATGGCTGCGGCCGTTCAGGACTCACGTGTGAGCCCAGGGGAGATACTGAAGCGTTCTCCGAAGAAGAAGAAAAAGATGAA
GATGGTAGCCAAGGCTGCAGCGTCGAAGCTAGAAGATGAGGTCAAAGACTCTTCTGATGGAGAAGGAAGCTGTGACTCAG
AGATGGACCACTCAGATGATGGAGCTGCAGAAGCAGACAGTGAGGACAATGTTGAATCCTGTGAGGAAGACAATGAAGAC
GCCGCAGAGTCGAGTGCTGGGACCAATTCAGGCTGGGCAGATGCCATGGCAAAAATCCTTAACAAAAAGACTCCTAAAAG
CAAAGCCACCATCCTCACCAAAAACAAAGAGCTGGAGAAGGAGAAGGAGAAGCTAAAGCAGGAGAGGCTGGAGAAAAGGA
AGCAGCTTGATAAGAAGCGGGAGTGGGAAATGCTGTGCAGAGTGAAGCCAGATGTTGTCAAAGACAAAGAGGCAGAGAGG
AACCTTCAGAGGATTGCGACAAGGGGTGTGGTGCAGCTCTTCAATGCTGTTCAGAAACACCAAAGGAATGTTGGCGAAAA
GGTTAAGGAAGCAGGAGGCTCCGTCCGCAAGCGAGCCAAGCTGATGTCAACTGTTTCCAAGAAGGATTTCATCAGTGTTC
TTCGAGGAATGGATGGTACAAGTAGGAACAGTCCTGCTGGGAAGAGCCCCAAAGCCAGACAGACTGAAGTGAAATCAGAA
GAGAGCCCAGGGTGGAAGATTCTGCGAGATGATTTCATGATGGGAGCCAGCATGAAGGACTGGGACAAGGAGAGCGAGGG
CGAGGAGCCTGCTGGTGGCAGGGCAGAGGCCGCAGCCAGCCGTTGA
ATGGCTGCGGCCGTTCAGGACTCACGTGTGAGCCCAGGGGAGATACTGAAGCGTTCTCCGAAGAAGAAGAAAAAGATGAA
GATGGTAGCCAAGGCTGCAGCGTCGAAGCTAGAAGATGAGGTCAAAGACTCTTCTGATGGAGAAGGAAGCTGTGACTCAG
AGATGGACCACTCAGATGATGGAGCTGCAGAAGCAGACAGTGAGGACAATGTTGAATCCTGTGAGGAAGACAATGAAGAC
GCCGCAGAGTCGAGTGCTGGGACCAATTCAGGCTGGGCAGATGCCATGGCAAAAATCCTTAACAAAAAGACTCCTAAAAG
CAAAGCCACCATCCTCACCAAAAACAAAGAGCTGGAGAAGGAGAAGGAGAAGCTAAAGCAGGAGAGGCTGGAGAAAAGGA
AGCAGCTTGATAAGAAGCGGGAGTGGGAAATGCTGTGCAGAGTGAAGCCAGATGTTGTCAAAGACAAAGAGGCAGAGAGG
AACCTTCAGAGGATTGCGACAAGGGGTGTGGTGCAGCTCTTCAATGCTGTTCAGAAACACCAAAGGAATGTTGGCGAAAA
GGTTAAGGAAGCAGGAGGCTCCGTCCGCAAGCGAGCCAAGCTGATGTCAACTGTTTCCAAGAAGGATTTCATCAGTGTTC
TTCGAGGAATGGATGGTACAAGTAGGAACAGTCCTGCTGGGAAGAGCCCCAAAGCCAGACAGACTGAAGTGAAATCAGAA
GAGAGCCCAGGGTGGAAGATTCTGCGAGATGATTTCATGATGGGAGCCAGCATGAAGGACTGGGACAAGGAGAGCGAGGG
CGAGGAGCCTGCTGGTGGCAGGGCAGAGGCCGCAGCCAGCCGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 8 .34 RPM |
| SRP007412_cerebellum | 7 .12 RPM |
| SRP007412_heart | 6 .51 RPM |
| SRP007412_kidney | 9 .26 RPM |
| SRP007412_liver | 12 .32 RPM |
| SRP007412_testis | 16 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000174 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012916 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017863 | ortholog_one2many | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001244 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012715 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3531 | 85.80 | 62.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000001305 retrocopies