Parental gene: | ENSOCUG00000017863 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 16:54851427..54906766(-) |
>ENSOCUG00000017863
ATGGCTGCGGCCGTTGCGAGCTCACGTGTGAGTGCGGGGAAGAAGCTGAAAAATTCGCTAAAGAAGAAGAAGAAGGTGAA
AATGATTGCCAAAGTCATAGCATCAGAGCTGGAAGAGGAGGTGAAAGATGCTTCCGACAGTGGAGGATCTATAGGAAGCT
GTGGATCAGAAAAGGGTCATTTTTCTGATGATGAAGCAATAGATGCTGACAATGAGGATGATGCTGAACCCTGTGACAAA
GAAAATGAAAATGCTGGAGAATCATGTGCTGGAACTAATATGGGCTGGGCAGATGCCATGGCTAAAATCCTCAACAAGAA
AACGCCTAAAAGTAAACCCACCATTCTAGTCAAAAATAAAGAACTGGAAAAGGAAAAAGAAAAGTTAAAGCAAGAAAGAC
TTGAGAGAAGAAAACAGCTTGATAAGAGGCGGGAGTGGGAAATGATGTGCAGAGTAAAGCCAGATGTTGTCAAAGACAAA
GAAGCAGAGAGAAATCTTCAGAGAATTGCAACGAGGGGTGTGGTGCAATTATTTAATGCTGTCCAAAAACATCAAAAGAA
TGTTGATGAAAAGGTTAAAGAAGCTGGAGGTTCTATTAGAAAGCGTGCTAAATTGATATCAACTGTTTCTAAGAAAGATT
TCATCAGTGTTTTGAGAGGAATGGATGGAACTGCAAATGAGAAAAGTTCAACTGAGAAGAACTCAAAAGCCAAACAGACT
AAAGCGAAATCAGAAGAGGGTCCAGGTTGGACGATCCTACGTGATGATTTCATGATGGGAGCATCTATGAAAGACTGGGA
CAAGGAAAGTGATGGGCCAGATAACAGCAGACCAGAATCTGCAAGTGACTCCGACGTGTAA
ATGGCTGCGGCCGTTGCGAGCTCACGTGTGAGTGCGGGGAAGAAGCTGAAAAATTCGCTAAAGAAGAAGAAGAAGGTGAA
AATGATTGCCAAAGTCATAGCATCAGAGCTGGAAGAGGAGGTGAAAGATGCTTCCGACAGTGGAGGATCTATAGGAAGCT
GTGGATCAGAAAAGGGTCATTTTTCTGATGATGAAGCAATAGATGCTGACAATGAGGATGATGCTGAACCCTGTGACAAA
GAAAATGAAAATGCTGGAGAATCATGTGCTGGAACTAATATGGGCTGGGCAGATGCCATGGCTAAAATCCTCAACAAGAA
AACGCCTAAAAGTAAACCCACCATTCTAGTCAAAAATAAAGAACTGGAAAAGGAAAAAGAAAAGTTAAAGCAAGAAAGAC
TTGAGAGAAGAAAACAGCTTGATAAGAGGCGGGAGTGGGAAATGATGTGCAGAGTAAAGCCAGATGTTGTCAAAGACAAA
GAAGCAGAGAGAAATCTTCAGAGAATTGCAACGAGGGGTGTGGTGCAATTATTTAATGCTGTCCAAAAACATCAAAAGAA
TGTTGATGAAAAGGTTAAAGAAGCTGGAGGTTCTATTAGAAAGCGTGCTAAATTGATATCAACTGTTTCTAAGAAAGATT
TCATCAGTGTTTTGAGAGGAATGGATGGAACTGCAAATGAGAAAAGTTCAACTGAGAAGAACTCAAAAGCCAAACAGACT
AAAGCGAAATCAGAAGAGGGTCCAGGTTGGACGATCCTACGTGATGATTTCATGATGGGAGCATCTATGAAAGACTGGGA
CAAGGAAAGTGATGGGCCAGATAACAGCAGACCAGAATCTGCAAGTGACTCCGACGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .31 RPM |
| SRP017611_kidney | 3 .34 RPM |
| SRP017611_brain | 6 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000174 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012916 | ortholog_many2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000001305 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001244 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012715 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_820 | 78.41 | 61.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_962 | 94.85 | 67.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_992 | 64.95 | 73.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1738 | 97.12 | 72.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000017863 retrocopies