Parental gene:

Nudt4, ENSMUSG00000020029

Aliases:Nudt4, 4933436C10Rik, DIPP2, DIPP2alpha, DIPP2beta, HDCMB47P
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:MGI Symbol;Acc:MGI:1918457]
Organism:Mouse (Mus musculus)
Coordinates:10:95547006..95564167(-)


>ENSMUSG00000020029
ATGAAGTTCAAGCCCAACCAGACGCGGACGTACGACCGCGAGGGCTTCAAGAAGAGGGCGGCCTGCCTGTGCTTCCGCAG
CGAGCAGGAGGACGAGGTGCTGCTGGTGAGTAGCAGTCGGTACCCAGACCAATGGATTGTCCCAGGAGGAGGGATGGAGC
CGGAGGAGGAGCCTGGCGGTGCTGCTGTGAGGGAAGTGTATGAAGAGGCTGGAGTCAAAGGAAAGCTAGGCAGACTGCTC
GGAATATTTGAGAATCAAGACCGGAAGCACAGAACATATGTTTATGTTCTGACTGTCACTGAAATATTGGAAGACTGGGA
AGACTCCGTGAATATAGGAAGGAAGAGAGAGTGGTTCAAAGTAGAAGATGCAATCAAGGTTCTTCAGTGTCATAAGCCTG
TCCACGCAGAGTATCTGGAAAAACTAAAGCTGGGCTGTTCTCCGACCAATGGAAATTCCTCGGTCCCTTCCCTCCCAGAT
AACAATGCCTTGTTTGTGACTGCTGCGCCGCCCTCTGGGGTGCCATCCAGTATAAGATAG

Library Parental gene expression (RPM)
SRP007412_brain 123 .03 RPM
SRP007412_cerebellum 85 .06 RPM
SRP007412_heart 180 .21 RPM
SRP007412_kidney 462 .55 RPM
SRP007412_liver 118 .11 RPM
SRP007412_testis 647 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009844 ortholog_one2one 2 retrogenes
retro_amel_1401, retro_amel_36,
Dasypus novemcinctus ENSDNOG00000015207 ortholog_one2one 3 retrogenes
retro_dnov_1906, retro_dnov_2555, retro_dnov_41,
Dipodomys ordii ENSDORG00000000647 ortholog_one2one 3 retrogenes
retro_dord_26, retro_dord_272, retro_dord_660,
Equus caballus ENSECAG00000019319 ortholog_one2one 1 retrogene
retro_ecab_472,
Echinops telfairi ENSETEG00000013922 ortholog_one2one 2 retrogenes
retro_etel_1627, retro_etel_2111,
ENSG00000173598 ortholog_one2one 0 retrogenes
Gorilla gorilla ENSGGOG00000014324 ortholog_one2one 1 retrogene
retro_ggor_108,
Loxodonta africana ENSLAFG00000013776 ortholog_one2one 1 retrogene
retro_lafr_1131,
Microcebus murinus ENSMICG00000007100 ortholog_one2one 2 retrogenes
retro_mmur_1521, retro_mmur_1565,
Myotis lucifugus ENSMLUG00000002767 ortholog_one2one 1 retrogene
retro_mluc_753,
Monodelphis domestica ENSMODG00000009468 ortholog_one2many 1 retrogene
retro_mdom_214,
Oryctolagus cuniculus ENSOCUG00000011283 ortholog_one2one 1 retrogene
retro_ocun_1905,
Pteropus vampyrus ENSPVAG00000013730 ortholog_one2one 1 retrogene
retro_pvam_1423,
Ictidomys tridecemlineatus ENSSTOG00000020306 ortholog_one2one 1 retrogene
retro_itri_112,
Tupaia belangeri ENSTBEG00000012198 ortholog_one2one 7 retrogenes
retro_tbel_1705, retro_tbel_2322, retro_tbel_3443, retro_tbel_3472, retro_tbel_3733, retro_tbel_3739, retro_tbel_4678,
Tursiops truncatus ENSTTRG00000003309 ortholog_one2one 2 retrogenes
retro_ttru_1625, retro_ttru_1925,
Vicugna pacos ENSVPAG00000002957 ortholog_one2one 1 retrogene
retro_vpac_507,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1201 73.22 100.00
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2. retro_mmus_1202 72.28 100.00
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3. retro_mmus_1203 71.58 100.00
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Download FASTA sequences of all ENSMUSG00000020029 retrocopies