RetrogeneDB ID: | retro_tbel_3739 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_150127:331221..331757(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUDT4 | ||
Ensembl ID: | ENSTBEG00000012198 | ||
Aliases: | None | ||
Description: | nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051] |
Percent Identity: | 83.61 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEE |
MM.FKPNQTRT.DREGFKKRAA.LCFRSEQ..E.LLVSSS.YPD.WIV.GGGMEPE.EPG.AAVREV..E | |
Retrocopy | MMEFKPNQTRTCDREGFKKRAAGLCFRSEQQ-EALLVSSSLYPDPWIVLGGGMEPEQEPG-AAVREVCAE |
Parental | AGVRGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEY |
AGVRGKLGRLLGIFE.N.D.KHRT.VYVLTVTEI.EDW.D.VNIGRKREWFKVEDAIK.LQC.KP.HA.Y | |
Retrocopy | AGVRGKLGRLLGIFE-NRD*KHRTCVYVLTVTEIPEDWGDAVNIGRKREWFKVEDAIKILQCPKPLHAAY |
Parental | LEKLKLGCSPTNGNSTVP-SLP-ESNALFVTAAQTSGLPSSVR |
LEKLKLGCSPTNGNSTVP.SLP.ES.ALFVT..QTSGL.SSVR | |
Retrocopy | LEKLKLGCSPTNGNSTVP>SLP>ESKALFVTSTQTSGLTSSVR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |