Parental gene: | Thoc3, ENSMUSG00000025872 |
| Aliases: | Thoc3, 2410044K02Rik, AL033344 |
| Description: | THO complex 3 [Source:MGI Symbol;Acc:MGI:1920916] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 13:54458836..54468849(-) |
>ENSMUSG00000025872
ATGGCGGCGCCCGCTGCGGTCCTGGGCCCCTCGGCCCTCGGCCAGAGCGGCCCCGGCTCGATGGCGCCCTGGTGCTCAGT
GAGCAGTGGCCCGTCTCGTTACGTGCTCGGGATGCAGGAGCTCTTCCGAGGCCACAGCAAGACGCGCGAATTCCCGGCGC
ACAGTGCTAAGGTGCACTCGGTCGCCTGGAGCTGCGATGGCCGTCGCTTGGCCTCGGGGTCCTTCGACAAGACTGCCAGC
GTGTTCTTGCTGGAGAAGGACCGGCTGGTCAAAGAAAACAACTACCGGGGCCACGGAGATAGTGTGGACCAGCTTTGTTG
GCACCCAAGCAACCCTGACCTCTTTGTCACCGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAAT
GCATCGCCACTGTGAATACGAAAGGGGAGAACATTAACATCTGTTGGAGTCCCGACGGGCAGACCATCGCTGTGGGCAAC
AAGGACGACGTTGTGACTTTCATTGACGCCAAGACACACCGCTCCAAAGCGGAGGAGCAGTTCAAGTTTGAGGTCAATGA
GATCTCATGGAACAACGACAACAACATGTTCTTCCTGACCAACGGCAATGGTTGCATCAACATCCTCAGCTACCCAGAAT
TGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAATACTTTGCC
ACAGGAAGTGCAGATGCCTTGGTCAGCCTTTGGGACGTTGACGAGTTAGTGTGCGTGCGGTGCTTTTCCAGACTAGATTG
GCCTGTGAGGACCCTCAGTTTTAGCCACGATGGGAAAATGCTGGCATCGGCTTCGGAGGACCATTTCATTGATATAGCTG
AAGTCGAGACAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCCCCGACTTTCACTGTGGCTTGGCACCCCAAGAGGCCT
CTGCTGGCTTTTGCCTGTGATGACAAAGATGGCAAATACGACAGCAGTCGGGAGGCTGGAACTGTGAAGCTGTTTGGACT
TCCCAATGACTCCTGA
ATGGCGGCGCCCGCTGCGGTCCTGGGCCCCTCGGCCCTCGGCCAGAGCGGCCCCGGCTCGATGGCGCCCTGGTGCTCAGT
GAGCAGTGGCCCGTCTCGTTACGTGCTCGGGATGCAGGAGCTCTTCCGAGGCCACAGCAAGACGCGCGAATTCCCGGCGC
ACAGTGCTAAGGTGCACTCGGTCGCCTGGAGCTGCGATGGCCGTCGCTTGGCCTCGGGGTCCTTCGACAAGACTGCCAGC
GTGTTCTTGCTGGAGAAGGACCGGCTGGTCAAAGAAAACAACTACCGGGGCCACGGAGATAGTGTGGACCAGCTTTGTTG
GCACCCAAGCAACCCTGACCTCTTTGTCACCGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAAT
GCATCGCCACTGTGAATACGAAAGGGGAGAACATTAACATCTGTTGGAGTCCCGACGGGCAGACCATCGCTGTGGGCAAC
AAGGACGACGTTGTGACTTTCATTGACGCCAAGACACACCGCTCCAAAGCGGAGGAGCAGTTCAAGTTTGAGGTCAATGA
GATCTCATGGAACAACGACAACAACATGTTCTTCCTGACCAACGGCAATGGTTGCATCAACATCCTCAGCTACCCAGAAT
TGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAATACTTTGCC
ACAGGAAGTGCAGATGCCTTGGTCAGCCTTTGGGACGTTGACGAGTTAGTGTGCGTGCGGTGCTTTTCCAGACTAGATTG
GCCTGTGAGGACCCTCAGTTTTAGCCACGATGGGAAAATGCTGGCATCGGCTTCGGAGGACCATTTCATTGATATAGCTG
AAGTCGAGACAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCCCCGACTTTCACTGTGGCTTGGCACCCCAAGAGGCCT
CTGCTGGCTTTTGCCTGTGATGACAAAGATGGCAAATACGACAGCAGTCGGGAGGCTGGAACTGTGAAGCTGTTTGGACT
TCCCAATGACTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 21 .24 RPM |
| SRP007412_cerebellum | 21 .45 RPM |
| SRP007412_heart | 13 .70 RPM |
| SRP007412_kidney | 18 .50 RPM |
| SRP007412_liver | 18 .46 RPM |
| SRP007412_testis | 21 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006495 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000001068 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000005339 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003503 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010757 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_441 | 86.78 | 68.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1821 | 54.70 | 50.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000025872 retrocopies