Parental gene:

Pkm, ENSMUSG00000032294

Aliases:Pkm, AA414905, AL024370, AL024424, Pk-2, Pk-3, Pk3, Pkm2
Description:pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
Organism:Mouse (Mus musculus)
Coordinates:9:59656367..59679375(+)


>ENSMUSG00000032294
ATGCCGAAGCCACACAGTGAAGCAGGGACTGCCTTCATTCAGACCCAGCAGCTCCATGCAGCCATGGCTGACACCTTCCT
GGAACACATGTGCCGCCTGGACATTGACTCTGCCCCCATCACGGCCCGCAACACTGGCATCATTTGTACCATTGGGCCTG
CTTCCCGATCTGTGGAGATGCTGAAGGAGATGATTAAGTCTGGAATGAATGTGGCTCGGCTGAATTTCTCTCATGGAACC
CATGAGTACCATGCAGAGACCATCAAGAATGTCCGTGAAGCCACAGAAAGCTTTGCATCTGATCCCATTCTCTACCGTCC
TGTTGCGGTGGCTCTGGATACAAAGGGACCTGAGATCCGGACTGGACTCATCAAGGGCAGCGGCACCGCTGAGGTGGAGC
TGAAGAAGGGAGCCACTCTGAAGATCACCCTGGACAACGCTTACATGGAGAAGTGTGACGAGAACATCCTGTGGCTGGAC
TACAAGAACATCTGCAAGGTGGTGGAGGTGGGCAGCAAGATCTACGTGGACGATGGGCTCATCTCACTGCAGGTGAAGGA
GAAAGGCGCTGACTTCCTGGTGACGGAGGTGGAGAATGGTGGCTCCTTGGGCAGCAAGAAGGGCGTGAACCTGCCGGGCG
CTGCTGTGGATCTCCCCGCTGTGTCGGAAAAGGACATCCAGGACCTGAAGTTTGGGGTGGAGCAGGATGTGGACATGGTG
TTTGCATCTTTCATCCGCAAGGCAGCCGACGTGCATGAAGTCAGGAAGGTGCTGGGAGAGAAGGGCAAGAACATCAAGAT
CATCAGCAAAATCGAGAACCATGAAGGCGTCCGCAGGTTTGATGAGATCTTGGAGGCCAGTGATGGGATCATGGTGGCTC
GTGGTGACCTGGGCATTGAGATTCCTGCAGAGAAGGTCTTCCTGGCTCAGAAGATGATGATCGGGCGATGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCCACACAGATGCTGGAGAGCATGATCAAGAAGCCACGCCCCACCCGTGCTGAAGGCAGTGA
TGTGGCCAATGCAGTCCTGGATGGAGCAGACTGCATCATGCTGTCTGGAGAAACAGCCAAGGGGGACTACCCTCTGGAGG
CTGTTCGCATGCAGCACCTGATTGCCCGAGAGGCAGAGGCTGCCATCTACCACTTGCAGCTATTCGAGGAACTCCGCCGC
CTGGCGCCCATTACCAGCGACCCCACAGAAGCTGCCGCCGTGGGTGCCGTGGAGGCCTCCTTCAAGTGCTGCAGTGGGGC
CATTATCGTGCTCACCAAGTCTGGCAGGAGTGCTCACCAAGTGGCCAGGTACCGCCCTCGGGCTCCTATCATTGCCGTGA
CTCGAAATCCCCAGACTGCTCGCCAGGCCCATCTGTACCGTGGCATCTTCCCTGTGCTGTGTAAGGATGCCGTGCTGAAT
GCCTGGGCTGAGGATGTCGACCTTCGTGTAAACTTGGCCATGGATGTTGGCAAGGCCCGAGGCTTCTTCAAGAAGGGAGA
TGTGGTCATTGTGCTGACCGGGTGGCGCCCTGGCTCTGGATTCACCAACACCATGCGTGTAGTGCCTGTACCTTGA

Library Parental gene expression (RPM)
SRP007412_brain 753 .97 RPM
SRP007412_cerebellum 976 .07 RPM
SRP007412_heart 1282 .44 RPM
SRP007412_kidney 505 .13 RPM
SRP007412_liver 20 .45 RPM
SRP007412_testis 322 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013504 ortholog_one2one 1 retrogene
retro_chof_1430,
Callithrix jacchus ENSCJAG00000018473 possible_ortholog 1 retrogene
retro_cjac_236,
Felis catus ENSFCAG00000000653 possible_ortholog 1 retrogene
retro_fcat_105,
Gorilla gorilla ENSGGOG00000005062 possible_ortholog 1 retrogene
retro_ggor_281,
Macropus eugenii ENSMEUG00000004506 ortholog_one2one 3 retrogenes
retro_meug_1482, retro_meug_2043, retro_meug_912,
Macaca mulatta ENSMMUG00000023454 ortholog_one2many 1 retrogene
retro_mmul_183,
Pongo abelii ENSPPYG00000006613 ortholog_one2one 3 retrogenes
retro_pabe_2834, retro_pabe_3645, retro_pabe_429,
Rattus norvegicus ENSRNOG00000011329 ortholog_one2many 6 retrogenes
retro_rnor_1120, retro_rnor_2050, retro_rnor_2253, retro_rnor_2703, retro_rnor_515, retro_rnor_830,
Sarcophilus harrisii ENSSHAG00000010300 ortholog_one2many 1 retrogene
retro_shar_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_854 92.18 81.92
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2. retro_mmus_1402 81.63 89.83
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3. retro_mmus_1678 61.80 59.51
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4. retro_mmus_1754 78.34 70.43
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5. retro_mmus_2065 85.29 81.54
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6. retro_mmus_2066 85.29 81.54
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7. retro_mmus_2636 97.19 100.00
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8. retro_mmus_3509 80.76 54.80
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Download FASTA sequences of all ENSMUSG00000032294 retrocopies