Parental gene: | Rexo4, ENSMUSG00000052406 |
| Aliases: | Rexo4, Gm111, Xpmc2h |
| Description: | REX4, RNA exonuclease 4 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2684957] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:26953562..26964386(-) |
>ENSMUSG00000052406
ATGTGTGCTTGCGCGGTTGCTGGAGTCGCGGTCTCTTCCCTGGTGGTTCCGACTGCGGAGAGCGGGGAGATGAAGACGAA
GGCCACCGCGCCGGTGCCCCAACCTGGGCCTATCAGGAAGCTCGCTAGGAAGAAAGCCAAGAAGAAGTTCAGGAAGAGCA
AAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCCGGCGGCTGTGGCAGGCCGACCGCCGAAGGCCCCCGAGAACTTT
TCTCAAAATTGGAAGGCGTTGCAAGAGCTACTGAAACAAAAGTCACAGGCCGCAGAAAAACCTCTTGTCTCTCAGATGGA
TGACAAAATGCACCCCCAAATAATCCAGCAGAACAGAAAAAAGGCCTCAGATAAATCAAAGGGAGACAAGCAGAGGACAG
AAAAGGCCAAGAGCACTAGGGGTTCTGTTACATCTGCACCTACGGACAGGAAGATACTAGTACCTCCCACAGATACCTCT
GGAACAGAGCAGAAGAAAGGAGCCAAGAAGAGGACATATAGTGACATCTCTTCTCATCAAGGGGCTCTCAAGCCTAAGTG
GAAAGCTACGGAGGCAGCTGTTATCTTGAATCAGCCCACGCCCACTGAGGAAGACATCTGGTTTGATGATGTGGATCCAG
ATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCC
CTGGAGAAGGAACAAGCCTTTGGCGGCTTGACAAAAGCCTTGGCCCTGGATTGTGAGATGGTAGGCGTGGGTCCCAAAGG
GGAAGAGAGCATCGCAGCCCGTGTGTCGATCGTGAACCAGTATGGGAAGTGTGTTTATGACAAGTACGTCAAGCCAACTG
AGCCAGTGACTGACTACAGGACAGCCGTCAGTGGGATCCGGCCTGAGAACCTGAAGCAGGGAGAAGAGTTTGAAGTTGTG
AAGAAGGAAGTGGCAGAAATGTTGAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGGTTTTGTTCCT
TGACCATCCAAAAAAGAAAATCAGGGACACTCAGAAATTCAAACCATTCAGGAGTCGAGTAAAGAGTGGACGACCGTCTC
TGAAACGGCTTTCTGAGAAAATTCTGGGGATCAGGGTCCAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGCA
ATGAGGCTTTACGTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCAGCTGCCACTCCACAGCA
CCGCATCAAGAACTCTTAG
ATGTGTGCTTGCGCGGTTGCTGGAGTCGCGGTCTCTTCCCTGGTGGTTCCGACTGCGGAGAGCGGGGAGATGAAGACGAA
GGCCACCGCGCCGGTGCCCCAACCTGGGCCTATCAGGAAGCTCGCTAGGAAGAAAGCCAAGAAGAAGTTCAGGAAGAGCA
AAGCTCTGGCAGGAAGTGGGGTTCCGGGAAGCCACCCGGCGGCTGTGGCAGGCCGACCGCCGAAGGCCCCCGAGAACTTT
TCTCAAAATTGGAAGGCGTTGCAAGAGCTACTGAAACAAAAGTCACAGGCCGCAGAAAAACCTCTTGTCTCTCAGATGGA
TGACAAAATGCACCCCCAAATAATCCAGCAGAACAGAAAAAAGGCCTCAGATAAATCAAAGGGAGACAAGCAGAGGACAG
AAAAGGCCAAGAGCACTAGGGGTTCTGTTACATCTGCACCTACGGACAGGAAGATACTAGTACCTCCCACAGATACCTCT
GGAACAGAGCAGAAGAAAGGAGCCAAGAAGAGGACATATAGTGACATCTCTTCTCATCAAGGGGCTCTCAAGCCTAAGTG
GAAAGCTACGGAGGCAGCTGTTATCTTGAATCAGCCCACGCCCACTGAGGAAGACATCTGGTTTGATGATGTGGATCCAG
ATGATATTGAGGATGCCATAGGCCCAGAGGCAGCCATGCTGGTACGGAAGAGGCTGGGGCAGAAGAAGAGGACCATCTCC
CTGGAGAAGGAACAAGCCTTTGGCGGCTTGACAAAAGCCTTGGCCCTGGATTGTGAGATGGTAGGCGTGGGTCCCAAAGG
GGAAGAGAGCATCGCAGCCCGTGTGTCGATCGTGAACCAGTATGGGAAGTGTGTTTATGACAAGTACGTCAAGCCAACTG
AGCCAGTGACTGACTACAGGACAGCCGTCAGTGGGATCCGGCCTGAGAACCTGAAGCAGGGAGAAGAGTTTGAAGTTGTG
AAGAAGGAAGTGGCAGAAATGTTGAAGGGCAGAATCCTGGTGGGGCATGCGCTACACAATGATTTAAAGGTTTTGTTCCT
TGACCATCCAAAAAAGAAAATCAGGGACACTCAGAAATTCAAACCATTCAGGAGTCGAGTAAAGAGTGGACGACCGTCTC
TGAAACGGCTTTCTGAGAAAATTCTGGGGATCAGGGTCCAACAGGCCGAGCACTGCTCAATCCAGGATGCCCAGGCAGCA
ATGAGGCTTTACGTCATGGTGAAACGGGAATGGGAGAGCAGTACTGCAAACCGGCGTGCCCCAGCTGCCACTCCACAGCA
CCGCATCAAGAACTCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 42 .73 RPM |
| SRP007412_cerebellum | 56 .62 RPM |
| SRP007412_heart | 15 .10 RPM |
| SRP007412_kidney | 27 .78 RPM |
| SRP007412_liver | 27 .72 RPM |
| SRP007412_testis | 18 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000012817 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013130 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019735 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1006 | 82.64 | 70.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2104 | 88.60 | 80.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000052406 retrocopies