Parental gene: | REXO4, ENSPPYG00000019735 |
| Aliases: | None |
| Description: | REX4, RNA exonuclease 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:12820] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:130351855..130366595(-) |
>ENSPPYG00000019735
ATGGGGAAGGCGAAGGTCCCCGCCTCCAAGGGCGCCTCGAGCAGCCCCGTGGCTAAGCCGGGTCCTGTCAAGACGCTCAC
TCGGAAGAAAAACAAGAAGAAAAAAAGGTTTTGGAAAAGCAAGGCGCAGGAAGTAAGCAAGAAGCCAGCAAGCGGCCCCG
GTGCTGTGGTGCGACCTCCAAAGGCACCAGAAGACTTTTCTCAAAACTGGAAGGCGCTGCAAGAGTGGCTGCTGAAACAA
AAATCTCAGGCCCCAGAAAAGCCTCTTGTCATCTCTCAGATGGGTTCCAAAAAGAAGCCCAAAATTATCCAGCAAAACAA
AAAAGAGACCTCGCCTCAAGTGAAGGGAGAGGAGATGCCGGCAGGAAAAGACCAAGAGGCCAGCAGGGGCTCTGTTCCTT
CAGGTTCCAAGATGGACAGGAAGGCGCAAGTACCTCGCACCAAGGCCAGTGGAGCAGAGCACAATAAGAAAGGAACCAAG
GAAAGGACAAATGGTGATATTGTTCCAGAACGAGGGGACATCAAGCATAAGAAGCGGAAAGCTAAGGAGGCAGCCCCGGC
CCCACCCACCGAGGAAGACATCTGGTTTGACGACGTGGACCCGGCGGATATCGAAGCTGCCATAGGTCCAGAGGCGGCCA
AGATAGCGAGGAAACAATTGGGTCAGAGCGAGGGCAGCATCAGCCTCAGCCTCGTGAAAGAGCAGGCCTTCAGCGGCCTG
ACAAGAGCCTTAGCCTTGGACTGTGAGATGGTGGGCGTGGGCCCTAAGGGGGAGGAGAGCGTGGCCGCCCGTGTGTCCAT
CGTGAACCAGTATGGGAAGTGCGTTTATGACAAGTACGTCAAACCAACCGAGCCCGTGACGGACTATAGGACAGCAGTCA
GTGGGATTCGGCCTGAGAACCTCAAGCAGGGAGAAGTGCTTGAAGTTGTTCAGAAGGAAGTGGCAGAGATGCTGAAGGGC
AGAATTCTAGTGGGGCACGCTCTGCATAATGACCTAAAGGTACTGTTTCTTGATCATCCAAAGAAGATTCGGGACACACA
GAAATATAAACCTTTCAAGAGTCAAGTAAAGAGTGGAAGACCGTCTCTGAGACTACTTTCAGAGAAGATCCTTGGGCTCC
AGGTCCAGCAAGCGGAGCACTGTTCGATTCAGGATGCCCAGGCAGCAATGAGGCTGTATGTCACGGTGAAGAAGGAGTGG
GAGAGCATGGCCCGAGAGAGGCGCCCCCTGCTGACCGCTCCAGACCACTGCAGTGACGACGCC
ATGGGGAAGGCGAAGGTCCCCGCCTCCAAGGGCGCCTCGAGCAGCCCCGTGGCTAAGCCGGGTCCTGTCAAGACGCTCAC
TCGGAAGAAAAACAAGAAGAAAAAAAGGTTTTGGAAAAGCAAGGCGCAGGAAGTAAGCAAGAAGCCAGCAAGCGGCCCCG
GTGCTGTGGTGCGACCTCCAAAGGCACCAGAAGACTTTTCTCAAAACTGGAAGGCGCTGCAAGAGTGGCTGCTGAAACAA
AAATCTCAGGCCCCAGAAAAGCCTCTTGTCATCTCTCAGATGGGTTCCAAAAAGAAGCCCAAAATTATCCAGCAAAACAA
AAAAGAGACCTCGCCTCAAGTGAAGGGAGAGGAGATGCCGGCAGGAAAAGACCAAGAGGCCAGCAGGGGCTCTGTTCCTT
CAGGTTCCAAGATGGACAGGAAGGCGCAAGTACCTCGCACCAAGGCCAGTGGAGCAGAGCACAATAAGAAAGGAACCAAG
GAAAGGACAAATGGTGATATTGTTCCAGAACGAGGGGACATCAAGCATAAGAAGCGGAAAGCTAAGGAGGCAGCCCCGGC
CCCACCCACCGAGGAAGACATCTGGTTTGACGACGTGGACCCGGCGGATATCGAAGCTGCCATAGGTCCAGAGGCGGCCA
AGATAGCGAGGAAACAATTGGGTCAGAGCGAGGGCAGCATCAGCCTCAGCCTCGTGAAAGAGCAGGCCTTCAGCGGCCTG
ACAAGAGCCTTAGCCTTGGACTGTGAGATGGTGGGCGTGGGCCCTAAGGGGGAGGAGAGCGTGGCCGCCCGTGTGTCCAT
CGTGAACCAGTATGGGAAGTGCGTTTATGACAAGTACGTCAAACCAACCGAGCCCGTGACGGACTATAGGACAGCAGTCA
GTGGGATTCGGCCTGAGAACCTCAAGCAGGGAGAAGTGCTTGAAGTTGTTCAGAAGGAAGTGGCAGAGATGCTGAAGGGC
AGAATTCTAGTGGGGCACGCTCTGCATAATGACCTAAAGGTACTGTTTCTTGATCATCCAAAGAAGATTCGGGACACACA
GAAATATAAACCTTTCAAGAGTCAAGTAAAGAGTGGAAGACCGTCTCTGAGACTACTTTCAGAGAAGATCCTTGGGCTCC
AGGTCCAGCAAGCGGAGCACTGTTCGATTCAGGATGCCCAGGCAGCAATGAGGCTGTATGTCACGGTGAAGAAGGAGTGG
GAGAGCATGGCCCGAGAGAGGCGCCCCCTGCTGACCGCTCCAGACCACTGCAGTGACGACGCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .82 RPM |
| SRP007412_cerebellum | 6 .44 RPM |
| SRP007412_heart | 3 .76 RPM |
| SRP007412_kidney | 9 .41 RPM |
| SRP007412_liver | 4 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000012817 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000052406 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013130 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1278 | 91.28 | 97.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019735 retrocopies