Parental gene: | Snupn, ENSMUSG00000055334 |
| Aliases: | Snupn, 0610031A09Rik, Rnut1, Snupn1 |
| Description: | snurportin 1 [Source:MGI Symbol;Acc:MGI:1913319] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:56950877..56983206(+) |
>ENSMUSG00000055334
ATGGAAGAACTGAGCCAAGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGAACTGAACAGCACAGCTGCCCCCCACCCACG
CCTGTGTCAATACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGGCGGCGCCAGCTACTGGAGCTGCAGAAATCCA
AGCGGTTGGATTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGTATGGAGAGTGGGGAAGAGGAAAAC
AAGAAAGATGAAGAGGAAATGGACATAGACCCTAGCAAGAAGTTACCAAAACGCTATGCTAATCAATTGATGCTTTCTGA
GTGGTTAATTGACGTCCCTTCAGATTTGGGGCAAGAATGGATTGTGGTTGTGTGTCCTGTTGGGAAAAGAGCCCTTATCG
TGGCCTCCAGGGGTTCAACAAGTGCCTACACTAAGAGTGGCTACTGTGTCAATAGGTTTTCTTCCCTTCTGCCCGGAGGC
AACAGGAGAAACTCAACAACAGCCAAAGACTACACCATTCTGGATTGCATTTACAGTGAGGTGAATCAGACATACTATGT
TTTGGATGTGATGTGCTGGCGGGGACATCCTTTTTATGACTGTCAGACTGATTTCCGATTCTACTGGATGCATTCAAAGT
TACCAGAAGAAGAAGGGCTTGGAGAGAAAACCAAGATTAATCCTTTTAAGTTTGTGGGGCTAAAGAATTTCCCGTGTACC
CCTGAGAGCCTGTGTGAGGTGCTGTCTATGGATTTTCCTTTTGAGGTAGATGGGCTGCTCTTCTACCATAAACAGACCCA
CTATAGCCCTGGGAGTACTCCTCTGGTGGGTTGGCTGCGCCCCTACATGGTGTCAGATATTCTGGGTGTAGCTGTTCCAG
CTGGCCCACTGACCACCAAGCCAGAATACGCTGGGCACCAGCTCCAACAGATTATTGAGCACAAGAGGAGCCAGGAAGAC
ACAAAGGAGAAACTCACACACAAGGCTTCTGAGAATGGCCACTATGAGCTGGAGCACCTGTCTACTCCCAAGTTAAGAAA
TCCTCCCCACAGCTCTGAGAGCCTCATGGACAACTAA
ATGGAAGAACTGAGCCAAGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGAACTGAACAGCACAGCTGCCCCCCACCCACG
CCTGTGTCAATACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGGCGGCGCCAGCTACTGGAGCTGCAGAAATCCA
AGCGGTTGGATTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGTATGGAGAGTGGGGAAGAGGAAAAC
AAGAAAGATGAAGAGGAAATGGACATAGACCCTAGCAAGAAGTTACCAAAACGCTATGCTAATCAATTGATGCTTTCTGA
GTGGTTAATTGACGTCCCTTCAGATTTGGGGCAAGAATGGATTGTGGTTGTGTGTCCTGTTGGGAAAAGAGCCCTTATCG
TGGCCTCCAGGGGTTCAACAAGTGCCTACACTAAGAGTGGCTACTGTGTCAATAGGTTTTCTTCCCTTCTGCCCGGAGGC
AACAGGAGAAACTCAACAACAGCCAAAGACTACACCATTCTGGATTGCATTTACAGTGAGGTGAATCAGACATACTATGT
TTTGGATGTGATGTGCTGGCGGGGACATCCTTTTTATGACTGTCAGACTGATTTCCGATTCTACTGGATGCATTCAAAGT
TACCAGAAGAAGAAGGGCTTGGAGAGAAAACCAAGATTAATCCTTTTAAGTTTGTGGGGCTAAAGAATTTCCCGTGTACC
CCTGAGAGCCTGTGTGAGGTGCTGTCTATGGATTTTCCTTTTGAGGTAGATGGGCTGCTCTTCTACCATAAACAGACCCA
CTATAGCCCTGGGAGTACTCCTCTGGTGGGTTGGCTGCGCCCCTACATGGTGTCAGATATTCTGGGTGTAGCTGTTCCAG
CTGGCCCACTGACCACCAAGCCAGAATACGCTGGGCACCAGCTCCAACAGATTATTGAGCACAAGAGGAGCCAGGAAGAC
ACAAAGGAGAAACTCACACACAAGGCTTCTGAGAATGGCCACTATGAGCTGGAGCACCTGTCTACTCCCAAGTTAAGAAA
TCCTCCCCACAGCTCTGAGAGCCTCATGGACAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 8 .60 RPM |
| SRP007412_cerebellum | 8 .60 RPM |
| SRP007412_heart | 8 .12 RPM |
| SRP007412_kidney | 6 .99 RPM |
| SRP007412_liver | 4 .94 RPM |
| SRP007412_testis | 20 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000014501 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004915 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005426 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_752 | 65.98 | 67.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000055334 retrocopies