Parental gene: | Snupn, ENSRNOG00000005426 |
| Aliases: | Snupn, Rnut1 |
| Description: | Snurportin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q68FP5] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:60185055..60217869(+) |
>ENSRNOG00000005426
ATGGAAGAACTGAGCCAAGCCCTAGCTAGTAGCTTTTCTGTGTCTCAAGAACTGAACAGCACAGCTGCCCCACACCCTCG
CCTGTCTCAATACAAGTCCAAGTATAGCTCCTTGGAGCAGAGTGAGCGGCGGCGCCAGTTGCTAGAGCTGCAGAAATCCA
AGCGGTTGGACTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGGGGAAGAGGAGAAG
AAGAAAGATGAGGAGGAAATGGATTTGGACCCTGTCAAGAAGTTACCAAAACGCTATGCTAATCAATTGATGCTTTCTGA
GTGGTTAATTGACGTCCCTTCAGATTTGGGGCAGGAATGGATTGTGGTTGTGTGCCCTGTTGGGAAAAGAGCCCTTATCG
TGGCCTCCAGGGGCTCAACCAGTGCCTACACTAAGAGTGGCTACTGCGTCAATAGGTTTTCTTCCCTTCTTCCAGGAGGC
AATAGGAGAAACTCAACAACAGCCAAAGACTACACCATTCTGGACTGCATTTACAGTGAAGTGAACCAGACATACTATGT
TTTGGATGTGATGTGCTGGCGGGGACATCCTTTTTATGACTGTCAGACTGATTTCCGATTCTACTGGATGAATTCAAAGT
TACCAGAAGAAGAAGGACTTGGAGAGAAAACCAAGATTAATCCCTTTAAGTTTGTGGGGCTTAAGAATTTCCCGTGTACC
CCTGAGAGCCTGTGCAAGGTGCTGTCTATGGATTTTCCTTTTGAGGTAGATGGACTGCTCTTCTACCACAAACAGACCCA
CTATAGCCCGGGGAGTACCCCTTTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATATTCTAGGTGTAGCTGTTCCAG
CTGGTCCTCTGACCACCAAGCCAGAATATGCTGGGCACCAGCTCCAACAGATTATTGAGCACAAGAGGAGTCAGGAGGAC
ACAAAGGAGAAACTCACACACAAGGCTTCTGAGAATGGCCACTATGAGCTGGAGCACCTGTCTACTCCCAAGCTGAGGAG
TCCTCCCCACAGCTCTGAGAGCCTCATGGACAGCTAA
ATGGAAGAACTGAGCCAAGCCCTAGCTAGTAGCTTTTCTGTGTCTCAAGAACTGAACAGCACAGCTGCCCCACACCCTCG
CCTGTCTCAATACAAGTCCAAGTATAGCTCCTTGGAGCAGAGTGAGCGGCGGCGCCAGTTGCTAGAGCTGCAGAAATCCA
AGCGGTTGGACTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGGGGAAGAGGAGAAG
AAGAAAGATGAGGAGGAAATGGATTTGGACCCTGTCAAGAAGTTACCAAAACGCTATGCTAATCAATTGATGCTTTCTGA
GTGGTTAATTGACGTCCCTTCAGATTTGGGGCAGGAATGGATTGTGGTTGTGTGCCCTGTTGGGAAAAGAGCCCTTATCG
TGGCCTCCAGGGGCTCAACCAGTGCCTACACTAAGAGTGGCTACTGCGTCAATAGGTTTTCTTCCCTTCTTCCAGGAGGC
AATAGGAGAAACTCAACAACAGCCAAAGACTACACCATTCTGGACTGCATTTACAGTGAAGTGAACCAGACATACTATGT
TTTGGATGTGATGTGCTGGCGGGGACATCCTTTTTATGACTGTCAGACTGATTTCCGATTCTACTGGATGAATTCAAAGT
TACCAGAAGAAGAAGGACTTGGAGAGAAAACCAAGATTAATCCCTTTAAGTTTGTGGGGCTTAAGAATTTCCCGTGTACC
CCTGAGAGCCTGTGCAAGGTGCTGTCTATGGATTTTCCTTTTGAGGTAGATGGACTGCTCTTCTACCACAAACAGACCCA
CTATAGCCCGGGGAGTACCCCTTTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATATTCTAGGTGTAGCTGTTCCAG
CTGGTCCTCTGACCACCAAGCCAGAATATGCTGGGCACCAGCTCCAACAGATTATTGAGCACAAGAGGAGTCAGGAGGAC
ACAAAGGAGAAACTCACACACAAGGCTTCTGAGAATGGCCACTATGAGCTGGAGCACCTGTCTACTCCCAAGCTGAGGAG
TCCTCCCCACAGCTCTGAGAGCCTCATGGACAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .83 RPM |
| SRP017611_kidney | 6 .28 RPM |
| SRP017611_brain | 8 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000014501 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000055334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004915 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_714 | 76.56 | 57.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2283 | 95.29 | 71.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000005426 retrocopies