Parental gene: | DFFB, ENSOANG00000013652 |
| Aliases: | None |
| Description: | DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) [Source:HGNC Symbol;Acc:2773] |
| Organism: | Platypus (Ornithorhynchus anatinus) |
| Coordinates: | Contig8561:830..14478(+) |
>ENSOANG00000013652
GGTTTAGAATCTCGATTTAAGAATAAATCTGGCTACATGAGGTACAGTTGCGAGAGCAGAATCCGGAGCTATATGAAAGA
GGTTAACACTTCCGCTTCGGCTATTGGACCCAAGGCTCAGGCGGAATACCTGAAGATTATTGGCTGCATGGGAGAGAAGC
TGAAAGCGGCCCAGTACAACGGCGGATACTTCGACAGGCGAGAAAAGAGGGCCCGGCTCTGTACGCCCGAAGGCTGGTTC
TCTTGCCAGGGTCCGTTTGACATTGACAGCTGCTTGTCTAAACATTCCATCAACCCTTACAGCAACAGAGAGAGCAGAAT
CCTTTTCAGCACGTGGAATCTGGATCATATAATAGAAAAGAAACGCACCGTCGTTCCGACCCTGGCAGAAGCAGTTCGGG
AACAGGATGGAAGAGAAGTAGACTGGGAGTACTTCTATAATCTCCTCTTTACCTCAGAGAATCTCAAATTAGTGCACATT
GCCTGCCATAAGAAAACCAGTCATAACCTCAGCTGTGACAAAACCAGGATTTACAGAGCCAGGGCAGCTGTTCCCCAGAA
ACGCAATCCAGTTTTTAAATTTAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 1 .06 RPM |
| SRP007412_cerebellum | 1 .26 RPM |
| SRP007412_heart | 0 .62 RPM |
| SRP007412_kidney | 0 .89 RPM |
| SRP007412_liver | 2 .17 RPM |
| SRP007412_testis | 2 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002834 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000169598 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013452 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015174 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oana_27 | 69.23 | 72.31 | Please wait, loading  |
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| 2. | retro_oana_91 | 65.65 | 66.15 | Please wait, loading |
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| 3. | retro_oana_116 | 65.54 | 90.77 | Please wait, loading |
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| 4. | retro_oana_117 | 65.52 | 89.23 | Please wait, loading |
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| 5. | retro_oana_125 | 68.53 | 72.31 | Please wait, loading |
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Download FASTA sequences of all ENSOANG00000013652 retrocopies