Parental gene:

SYNCRIP, ENSOCUG00000000601

Aliases:None
Description:synaptotagmin binding, cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:16918]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:72668288..72696556(-)


>ENSOCUG00000000601
ATGGCTACAGAACATGTTAATGGAAATGGTACTGAAGAGCCCATGGATACTACTTCCGCAGTTATCCATTCAGAAAATTT
TCAGACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATGAAATTTACGTTGCAGGGCTAGTTGCAC
ATAGTGATTTAGATGAAAGAGCTATTGAAGCTTTGAAAGAATTCAATGAAGACGGTGCATTGGCAGTTCTTCAGCAGTTT
AAAGACAGTGATCTCTCTCATGTTCAGAACAAAAGTGCCTTTTTATGTGGAGTCATGAAGACTTACAGGCAGAGAGAAAA
ACAGGGGACCAAAGTAGCGGACTCTAGTAAAGGACCAGATGAGGCAAAAATTAAGGCACTCTTGGAAAGAACAGGCTACA
CACTTGATGTGACCACTGGACAGAGGAAGTATGGGGGACCGCCTCCAGATTCCGTTTATTCAGGTCAGCAGCCTTCTGTT
GGCACTGAGATATTTGTGGGGAAGATCCCAAGAGATCTATTTGAGGATGAGCTTGTTCCTTTATTTGAGAAAGCTGGACC
TATTTGGGATCTTCGTCTTATGATGGATCCACTCACTGGTCTCAATAGAGGTTATGCGTTTGTCACTTTTTGTACAAAAG
AAGCAGCTCAGGAGGCTGTTAAACTGTATAATAATCATGAAATTCGTTCTGGAAAACATATTGGTGTCTGCATCTCGGTT
GCCAACAATAGGCTTTTTGTCGGCTCTATTCCTAAGAGTAAAACCAAGGAACAGATTCTTGAAGAATTTAGCAAAGTAAC
AGAGGGTCTTACAGACGTCATTTTATACCACCAACCAGATGACAAGAAAAAAAACAGAGGCTTTTGCTTTCTTGAATATG
AAGATCACAAAACAGCTGCCCAGGCAAGGCGTAGGCTAATGAGTGGTAAAGTCAAGGTCTGGGGAAATGTTGGAACTGTT
GAATGGGCTGATCCTATAGAAGATCCTGATCCTGAGGTTATGGCAAAGGTGAAGGTACTTTTTGTACGTAACCTTGCCAA
TACTGTAACAGAAGAGATTTTAGAAAAGGCATTTAGTCAGTTTGGAAAACTGGAACGAGTAAAGAAACTAAAAGATTATG
CATTCATTCATTTTGATGAACGAGATGGTGCTGTTAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAGGGAGAAAAC
ATTGAAATTGTTTTTGCTAAGCCACCAGATCAGAAAAGGAAAGAAAGAAAAGCTCAGAGGCAAGCAGCAAAGAATCAGAT
GTATGATGATTACTACTATTATGGTCCACCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGTAGAGGTGGTT
ATGGATATCCTCCAGATTATTATGGATATGAAGATTATTATGATTATTATGGCTATGATTACCATAACTATCGTGGTGGA
TATGAAGATCCATACTATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGC
TCCATCCAGAGGTCGTGGGGCTGCTCCTCCCCGTGGTAGAGCCGGTTATTCACAGAGAGGAGGTCCTGGATCAGCAAGAG
GCGTTCGTGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGGTACGTGGTGCGAGGGGTGGCCGCGGTGGAAAT
GTAGGAGGAAAGCGCAAAGCTGATGGGTACAACCAGCCAGATTCCAAGCGGCGCCAGACCAATAATCAGAACTGGGGCTC
CCAACCCATTGCTCAGCAACCGCTCCAAGGTGGTGATCATTCTGGTAACTATGGTTACAAATCTGAAAACCAGGAGTTTT
ATCAGGATACTTTTGGGCAACAGTGGAAATAG

Library Parental gene expression (RPM)
SRP017611_liver 41 .77 RPM
SRP017611_kidney 55 .64 RPM
SRP017611_brain 35 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018345 ortholog_one2one 1 retrogene
retro_dnov_1927,
Homo sapiens ENSG00000135316 ortholog_one2one 1 retrogene
retro_hsap_2410,
Macaca mulatta ENSMMUG00000012575 ortholog_one2one 1 retrogene
retro_mmul_1843,
Nomascus leucogenys ENSNLEG00000012879 ortholog_one2one 1 retrogene
retro_nleu_162,
Pongo abelii ENSPPYG00000016819 ortholog_one2one 1 retrogene
retro_pabe_1775,
Pan troglodytes ENSPTRG00000018393 ortholog_one2one 1 retrogene
retro_ptro_1387,
Rattus norvegicus ENSRNOG00000000204 ortholog_one2one 1 retrogene
retro_rnor_805,
Sus scrofa ENSSSCG00000004294 ortholog_one2one 1 retrogene
retro_sscr_436,
Vicugna pacos ENSVPAG00000001061 ortholog_one2one 1 retrogene
retro_vpac_391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1683 89.55 62.28
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000000601 retrocopies