Parental gene:

Syncrip, ENSRNOG00000000204

Aliases:None
Description:Heterogeneous nuclear ribonucleoprotein Q [Source:UniProtKB/Swiss-Prot;Acc:Q7TP47]
Organism:Rat (Rattus norvegicus)
Coordinates:8:95602782..95628111(-)


>ENSRNOG00000000204
CATTCAGAAAATTTTCAGACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATGAAATTTACGTTGC
AGGTCAGAGGAAGTATGGGGGGCCACCTCCAGATTCTGTTTATTCAGGTCAGCAGCCTTCTGTTGGCACTGAGATATTTG
TGGGGAAGATCCCCAGAGATCTGTTTGAAGATGAGCTTGTTCCATTGTTTGAGAAAGCTGGACCTATATGGGATCTTCGT
TTAATGATGGATCCACTTACTGGTCTCAACAGAGGTTATGCCTTTGTCACTTTTTGTACAAAAGAAGCAGCACAAGAGGC
TGTTAAACTGTATAATAATCATGAAATTCGTTCCGGGAAACATATTGGTGTCTGCATCTCAGTTGCCAACAATAGGCTTT
TTGTGGGCTCTATTCCTAAGAGTAAAACCAAGGAACAGATTCTTGAAGAATTTAGTAAAGTGACAGAGGGTCTCACAGAT
GTCATTTTATACCACCAACCTGATGACAAGAAAAAAAACAGAGGCTTTTGCTTTCTTGAATATGAAGATCATAAAACAGC
TGCCCAGGCAAGGCGTAGGCTAATGAGTGGTAAAGTTAAAGTCTGGGGAAATGTTGGAACTGTTGAATGGGCTGATCCTA
TTGAAGATCCTGATCCTGAAGTTATGGCAAAGGTAAAAGTGCTGTTTGTACGCAACCTTGCCAACACTGTAACAGAAGAA
ATTTTAGAAAAGTCGTTTAGTCAGTTTGGGAAACTGGAACGAGTGAAGAAGCTAAAAGATTATGCTTTCATTCATTTTGA
TGAGAGAGATGGTGCTGTCAAGGCTATGGAAGAAATGAATGGTAAAGACTTGGAGGGAGAAAACATTGAAATTGTTTTTG
CTAAGCCACCAGATCAGAAGAGGAAAGAAAGAAAAGCTCAGAGGCAAGCAGCAAAGAATCAAATGTATGATGATTACTAC
TATTATGGTCCACCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGTAGAGGTGGCTATGGATATCCTCCAGA
TTATTATGGATACGAAGATTATTATGATTATTATGGTTATGATTACCATAACTATCGTGGTGGATATGAAGATCCATATT
ATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGCTCCATCCAGAGGTCGC
GGGGCTGCTCCTCCCCGTGGTAGAGCCGGTTATTCACAGAGAGGAGGCCCTGGATCAGCAAGAGGCGTTCGTGGTGCGAG
AGGAGGTGCCCAACAACAAAGAGGCCGCGGGGTACGTGGTGCAAGGGGTGGCCGCGGTGGAAATGTAGGAGGAAAGCGCA
AAGCTGATGGGTACAACCAGCCAGATTCCAAGCGGCGCCAGACCAATAATCAGAACTGGGGCTCCCAACCCATTGCTCAG
CAACCGCTCCAAGGTGGTGATCATTCTGGTAACTATGGTTACAAATCTGAAAACGAGGAGTTTTATCAGGATACTTTTGG
GCAACAGTGGAAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 18 .55 RPM
SRP017611_kidney 26 .59 RPM
SRP017611_liver 17 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018345 ortholog_one2one 1 retrogene
retro_dnov_1927,
Homo sapiens ENSG00000135316 ortholog_one2one 1 retrogene
retro_hsap_2410,
Macaca mulatta ENSMMUG00000012575 ortholog_one2one 1 retrogene
retro_mmul_1843,
Nomascus leucogenys ENSNLEG00000012879 ortholog_one2one 1 retrogene
retro_nleu_162,
Oryctolagus cuniculus ENSOCUG00000000601 ortholog_one2one 1 retrogene
retro_ocun_1683,
Pongo abelii ENSPPYG00000016819 ortholog_one2one 1 retrogene
retro_pabe_1775,
Pan troglodytes ENSPTRG00000018393 ortholog_one2one 1 retrogene
retro_ptro_1387,
Rattus norvegicus ENSRNOG00000016894 within_species_paralog 1 retrogene
retro_rnor_2782,
Sus scrofa ENSSSCG00000004294 ortholog_one2one 1 retrogene
retro_sscr_436,
Vicugna pacos ENSVPAG00000001061 ortholog_one2one 1 retrogene
retro_vpac_391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_805 56.13 59.88
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Download FASTA sequences of all ENSRNOG00000000204 retrocopies