Parental gene: | CCNC, ENSOCUG00000003309 |
| Aliases: | None |
| Description: | cyclin C [Source:HGNC Symbol;Acc:1581] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 12:87180020..87211878(-) |
>ENSOCUG00000003309
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAGTGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGACTTAAAATTTCTCTCAGAAGAAGAATATTGGAAATTACAAATATTTTTTACAAATGTTATCCAAGCATTAGGTGAGC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATACAAG
ATTGATTTCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTTTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGTCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTTCATGTAGCCTGTGTCGTGCAGCAGAAAGATGCCA
GACAGTGGTTTGCTGAACTTTCTGTGGATATGGAAAAGATTTTGGAAATTATCAGGGTTATTTTAAAATTATATGAACAG
TGGAAGAATTTTGATGAGAGGAAAGAGATGGCAACAATTCTTAGTAAGATGCCGAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAGTGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGACTTAAAATTTCTCTCAGAAGAAGAATATTGGAAATTACAAATATTTTTTACAAATGTTATCCAAGCATTAGGTGAGC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATACAAG
ATTGATTTCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTTTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGTCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTTCATGTAGCCTGTGTCGTGCAGCAGAAAGATGCCA
GACAGTGGTTTGCTGAACTTTCTGTGGATATGGAAAAGATTTTGGAAATTATCAGGGTTATTTTAAAATTATATGAACAG
TGGAAGAATTTTGATGAGAGGAAAGAGATGGCAACAATTCTTAGTAAGATGCCGAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .32 RPM |
| SRP017611_kidney | 16 .42 RPM |
| SRP017611_brain | 13 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008954 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000003525 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011999 | ortholog_one2many | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000008393 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012815 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000012972 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000004353 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017525 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_888 | 77.42 | 53.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1753 | 72.65 | 85.87 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000003309 retrocopies