Parental gene:

FAR1, ENSOCUG00000004336

Aliases:None
Description:fatty acyl CoA reductase 1 [Source:HGNC Symbol;Acc:26222]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:155436353..155497399(+)


>ENSOCUG00000004336
ATGGTCTCAATCCCAGAATACTATGAAGGCAAGAATGTTCTGCTCACTGGAGCTACTGGCTTCCTAGGAAAAGTGCTTCT
GGAGAAGTTGCTGAGGTCTTGTCCAAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGGCAGACCCCTCAAG
AACGAGTGGAAGAAATCTTGAGTGGCAAGCTGTTTGATCGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATAATA
GCAATCAACAGTGAACTTACTCAACCTAAACTGGCTCTTAGTGAGGAAGATAAAGAGGTCATCGTAGATTCTACCAATAT
TATATTCCACTGTGCAGCCACTGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCTACAAGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAACTTGGAGGTGTTCATGCATGTATCTACAGCATATGCCTACTGCAATCGA
AAGCATATTGATGAAGTAGTATATCCACCCCCTGTAGACCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACACCAAAATTGATAGGAGATAGACCTAATACGTACATATACACGAAAGCGTTGGCAGAGTATG
TTGTACAACAAGAAGGAGCAAAGCTAAACGTGGCGATTGTAAGGCCATCAATTGTCGGTGCCAGTTGGAAAGAACCTTTT
CCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTGTTCATTGCGGCAGGGAAAGGAATTCTTCGAACAATGCGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACACGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTACAATTGTACAACAGGCAGCACTAATCCTTTCCACTGGGGCGAAGTTGGATAT
TATCTAAATCATTTCTTCAAGATGAATCCTTTAAACCAAGTATTCAGGCGCCCCAATATTAAGTTGTATTCCAACAACCT
ATTGCTTCATTATTGGAAGGGTGTCAGACATACAGTACCTGCATTATTGCTCGATCTTGCACTCAGGTTGACAGGTCAGA
AACCGTGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTGAATATGTTAATGAATCAACTAAACCCTGAAGACAAAAAGACCTTCAATATTGATGTACGGCA
GTTACATTGGGCAGAGTATATAGAGAACTACTGCATGGGAACTAAGAAATATGTACTGAACGAAGAAATGTCTGGCCTCC
CTGCTGCTAGAAAGCATCTGAACAAATTGCGGAACATACGTTATGGCTTCAATACTATTCTTGTGATTCTGATCTGGCGC
ATTTTTATTGCAAGATCACAAATGGCAAGAAACATCTGA

Library Parental gene expression (RPM)
SRP017611_brain 45 .48 RPM
SRP017611_kidney 31 .72 RPM
SRP017611_liver 1 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003490 ortholog_one2one 2 retrogenes
retro_chof_1358, retro_chof_1733,
Callithrix jacchus ENSCJAG00000010077 ortholog_one2many 1 retrogene
retro_cjac_545,
Cavia porcellus ENSCPOG00000002654 ortholog_one2one 1 retrogene
retro_cpor_267,
Homo sapiens ENSG00000197601 ortholog_one2one 1 retrogene
retro_hsap_1225,
Gorilla gorilla ENSGGOG00000001180 ortholog_one2one 1 retrogene
retro_ggor_958,
Macaca mulatta ENSMMUG00000011990 ortholog_one2one 1 retrogene
retro_mmul_1301,
Nomascus leucogenys ENSNLEG00000017695 ortholog_one2one 1 retrogene
retro_nleu_698,
Otolemur garnettii ENSOGAG00000005064 ortholog_one2one 2 retrogenes
retro_ogar_1353, retro_ogar_341,
Pongo abelii ENSPPYG00000003470 ortholog_one2one 1 retrogene
retro_pabe_1019,
Pan troglodytes ENSPTRG00000024190 ortholog_one2one 1 retrogene
retro_ptro_840,
Rattus norvegicus ENSRNOG00000013176 ortholog_one2one 1 retrogene
retro_rnor_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_790 73.95 52.24
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2. retro_ocun_1056 90.45 100.00
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Download FASTA sequences of all ENSOCUG00000004336 retrocopies