Parental gene: | FAR1, ENSOCUG00000004336 |
| Aliases: | None |
| Description: | fatty acyl CoA reductase 1 [Source:HGNC Symbol;Acc:26222] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:155436353..155497399(+) |
>ENSOCUG00000004336
ATGGTCTCAATCCCAGAATACTATGAAGGCAAGAATGTTCTGCTCACTGGAGCTACTGGCTTCCTAGGAAAAGTGCTTCT
GGAGAAGTTGCTGAGGTCTTGTCCAAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGGCAGACCCCTCAAG
AACGAGTGGAAGAAATCTTGAGTGGCAAGCTGTTTGATCGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATAATA
GCAATCAACAGTGAACTTACTCAACCTAAACTGGCTCTTAGTGAGGAAGATAAAGAGGTCATCGTAGATTCTACCAATAT
TATATTCCACTGTGCAGCCACTGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCTACAAGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAACTTGGAGGTGTTCATGCATGTATCTACAGCATATGCCTACTGCAATCGA
AAGCATATTGATGAAGTAGTATATCCACCCCCTGTAGACCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACACCAAAATTGATAGGAGATAGACCTAATACGTACATATACACGAAAGCGTTGGCAGAGTATG
TTGTACAACAAGAAGGAGCAAAGCTAAACGTGGCGATTGTAAGGCCATCAATTGTCGGTGCCAGTTGGAAAGAACCTTTT
CCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTGTTCATTGCGGCAGGGAAAGGAATTCTTCGAACAATGCGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACACGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTACAATTGTACAACAGGCAGCACTAATCCTTTCCACTGGGGCGAAGTTGGATAT
TATCTAAATCATTTCTTCAAGATGAATCCTTTAAACCAAGTATTCAGGCGCCCCAATATTAAGTTGTATTCCAACAACCT
ATTGCTTCATTATTGGAAGGGTGTCAGACATACAGTACCTGCATTATTGCTCGATCTTGCACTCAGGTTGACAGGTCAGA
AACCGTGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTGAATATGTTAATGAATCAACTAAACCCTGAAGACAAAAAGACCTTCAATATTGATGTACGGCA
GTTACATTGGGCAGAGTATATAGAGAACTACTGCATGGGAACTAAGAAATATGTACTGAACGAAGAAATGTCTGGCCTCC
CTGCTGCTAGAAAGCATCTGAACAAATTGCGGAACATACGTTATGGCTTCAATACTATTCTTGTGATTCTGATCTGGCGC
ATTTTTATTGCAAGATCACAAATGGCAAGAAACATCTGA
ATGGTCTCAATCCCAGAATACTATGAAGGCAAGAATGTTCTGCTCACTGGAGCTACTGGCTTCCTAGGAAAAGTGCTTCT
GGAGAAGTTGCTGAGGTCTTGTCCAAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGGCAGACCCCTCAAG
AACGAGTGGAAGAAATCTTGAGTGGCAAGCTGTTTGATCGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATAATA
GCAATCAACAGTGAACTTACTCAACCTAAACTGGCTCTTAGTGAGGAAGATAAAGAGGTCATCGTAGATTCTACCAATAT
TATATTCCACTGTGCAGCCACTGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCTACAAGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAACTTGGAGGTGTTCATGCATGTATCTACAGCATATGCCTACTGCAATCGA
AAGCATATTGATGAAGTAGTATATCCACCCCCTGTAGACCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACACCAAAATTGATAGGAGATAGACCTAATACGTACATATACACGAAAGCGTTGGCAGAGTATG
TTGTACAACAAGAAGGAGCAAAGCTAAACGTGGCGATTGTAAGGCCATCAATTGTCGGTGCCAGTTGGAAAGAACCTTTT
CCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTGTTCATTGCGGCAGGGAAAGGAATTCTTCGAACAATGCGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACACGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTACAATTGTACAACAGGCAGCACTAATCCTTTCCACTGGGGCGAAGTTGGATAT
TATCTAAATCATTTCTTCAAGATGAATCCTTTAAACCAAGTATTCAGGCGCCCCAATATTAAGTTGTATTCCAACAACCT
ATTGCTTCATTATTGGAAGGGTGTCAGACATACAGTACCTGCATTATTGCTCGATCTTGCACTCAGGTTGACAGGTCAGA
AACCGTGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTGAATATGTTAATGAATCAACTAAACCCTGAAGACAAAAAGACCTTCAATATTGATGTACGGCA
GTTACATTGGGCAGAGTATATAGAGAACTACTGCATGGGAACTAAGAAATATGTACTGAACGAAGAAATGTCTGGCCTCC
CTGCTGCTAGAAAGCATCTGAACAAATTGCGGAACATACGTTATGGCTTCAATACTATTCTTGTGATTCTGATCTGGCGC
ATTTTTATTGCAAGATCACAAATGGCAAGAAACATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .77 RPM |
| SRP017611_kidney | 31 .72 RPM |
| SRP017611_brain | 45 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003490 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000010077 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002654 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000197601 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001180 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011990 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017695 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005064 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003470 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000024190 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013176 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_790 | 73.95 | 52.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1056 | 90.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000004336 retrocopies