Parental gene:

ENSOCUG00000005367

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018750:1820477..1844753(-)


>ENSOCUG00000005367
TCAAGTGAGTGCTTTGATCAGATAGTTTTAGGTACTGATTTTACAAAGGAATGTATCTTGTCGGGTATCATGTCAGTGAA
TGGAAAGAAAGTTCTTCACATGGATCAAAACCCATACTATGGAGGAGAAAGTGCATCTATAACACCTCTGGAAGATTTAT
ACAAAAGATTTAAAATACCAGGATCACCACCATCATCAATGGGGAGAGGAAGAGACTGGAATGTTGACTTAATTCCCAAG
TTCCTTATGGCTAATGGTCAGCTGGTTAAGATGCTGCTTTATACAGAAGTCACTCGTTATCTGGATTTCAAAGTGACAGA
AGGAAGCTTTGTCTATAAAGGAGGAAAAATCTACAAGGTTCCTTCCACTGAAGCAGAAGCCCTTGCATCTAGCTTAATGG
GACTATTTGAAAAACGTCGCTTCAGAAAATTCCTGGTGTATGTTGCCAACTTTGATGAAAACGATGCTAGAACTTTTGAA
GGTGTTGATCCCAAGAAGACTGCAATGCGAGATGTGTATAAGAAATTTGATTTGGGCCAAGATGTTATCGATTTTACAGG
TCATGCTCTTGCACTCTATAGAACTGATGACTACTTAGATCAACCATGTTGTGAAACCATTAATAGAATTAAACTTTACA
GTGAGTCTCTGGCGCGATATGGCAAAAGCCCATACCTTTATCCACTCTATGGCCTTGGGGAACTCCCACAAGGATTTGCA
AGGCTAAGTGCTATTTATGGTGGTACCTACATGCTGAATAAACCTATCGAAGAAATCATTGTGCAGAATGGGAAGGTGGT
TGGTGTAAAATCTGAAGGAGAGATTGCTCGCTGTAAGCAGCTCATCTGTGACCCCAGCTATGTAAAAGATCGGGTGGAGA
AAGTGGGCCAGGTGATAAGAGTTATCTGCATTCTTAGTCATCCCATCAAGAATACCAACGATGCCAACTCCTGCCAGATC
ATTATTCCACAAAACCAAGTCAATCGAAAGTCAGATATCTATGTCTGCATGATTTCCTCTGCACACAATGTGGCAGCACA
AGGGAAGTACATTGCCATAGTCAGTACAACTATGGAAACCAAGGAACCTGAGAAAGAAATCAGACCAGCTTTGGAACTGT
TGGAACCAATTGAACAGAAATTTGTTAGCATCAGTGACCTCCTTGTGCCAAAAGATTTGGGAAAAGAAAGCCAGATCTTT
ATTTCCCGCACATATGATGCTACGACTCACTTTGAGACAACTTGTGATGACATTAAAGACATCTATAAGAGGATGACAGG
ATCAGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAAAATGACATCTATGGGGAAGACTAA

Library Parental gene expression (RPM)
SRP017611_liver 46 .01 RPM
SRP017611_kidney 49 .87 RPM
SRP017611_brain 35 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005316 ortholog_one2many 1 retrogene
retro_btau_1208,
Canis familiaris ENSCAFG00000005223 ortholog_one2many 2 retrogenes
retro_cfam_2196, retro_cfam_886,
Callithrix jacchus ENSCJAG00000020512 ortholog_one2many 2 retrogenes
retro_cjac_1168, retro_cjac_3115,
Cavia porcellus ENSCPOG00000013449 ortholog_one2many 1 retrogene
retro_cpor_696,
Gorilla gorilla ENSGGOG00000003623 ortholog_one2many 1 retrogene
retro_ggor_2590,
Mus musculus ENSMUSG00000021218 ortholog_one2many 2 retrogenes
retro_mmus_2971, retro_mmus_360,
Oryctolagus cuniculus ENSOCUG00000012819 within_species_paralog 1 retrogene
retro_ocun_893,
Ictidomys tridecemlineatus ENSSTOG00000006449 ortholog_one2many 1 retrogene
retro_itri_757,
Tupaia belangeri ENSTBEG00000011523 ortholog_one2many 1 retrogene
retro_tbel_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_69 97.98 99.78
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Download FASTA sequences of all ENSOCUG00000005367 retrocopies