Parental gene: | GDI2, ENSCAFG00000005223 |
| Aliases: | GDI2, GDI-2 |
| Description: | Canis lupus familiaris GDP dissociation inhibitor 2 (GDI2), mRNA. [Source:RefSeq mRNA;Acc:NM_001003184] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 2:30150768..30168957(+) |
>ENSCAFG00000005223
GAATGTATCCTGTCAGGTATAATGTCGGTGAATGGGAAGAAAGTTCTTCACATGGATAGAAACCCATATTATGGAGGAGA
AAGTGCATCTATAACACCTCTGGAAGATTTATACAAAAGATTTAAGATACCAGGAGCACCACCAGCCTCGATGGGAAGAG
GGAGAGACTGGAACGTGGACCTGATCCCTAAGTTCCTCATGGCCAATGGTCAGCTTGTGAAGATGCTGCTTTATACAGAG
GTCACTCGTTATCTGGATTTCAAAGTGACTGAAGGGAGCTTTGTCTACAAGGGAGGAAAAATCTACAAGGTTCCTTCCAC
TGAAGCAGAAGCCCTGGCATCTAGCTTAATGGGACTGTTTGAAAAACGTCGCTTCAGAAAATTCCTAGTGTATGTTGCCA
ACTTTGATGAAAAAGATCCCAGAACTTTTGAGGGCATCGATCCTAAGAAGACTGCCATGCGAGAGGTGTACAAGAAATTT
GACTTGGGACAAGATGTCATAGACTTTACTGGCCATGCCCTGGCACTTTACAGGACCGATGACTATTTAGATCAGCCATG
TTGTGAAACCATTAATAGGATTAAACTTTACAGCGAGTCTCTGGCAAGATATGGCAAAAGCCCGTACCTCTACCCACTGT
ATGGCCTTGGGGAGCTGCCGCAGGGATTTGCAAGGCTAAGTGCTATTTATGGTGGCACCTACATGCTCAATAAACCCATT
GAAGAAATCATTGTGCAAAATGGCAAAGTGATTGGTGTGAAATCTGAAGGAGAGGTTGCTCGCTGCAAGCAGCTCATCTG
TGACCCCAGCTACGTCAAAGACCGGGTAGAGAAGGTGGGCCAGGTCATCAGGGTTATCTGCATTCTCAGCCACCCCATCA
AGAACACCAATGACGCCAACTCCTGCCAGATCATCATCCCCCAGAACCAGGTCAATCGGAAGTCAGACATCTACGTGTGC
ATGATTTCCTCTGCACACAATGTGGCCGCGCAAGGGAAGTACATCGCCATAGTGAGCACGACGGTGGAGACCAAGGAACC
TGAGAAGGAAATCAGACCAGCTTTGGAGCTTCTGGAACCAATTGAACAGAAATTTGTTAGCATCAGCGACCTCCTTGTAC
CCAAAGACCTGGGGACGGAAAGCCAGATCTTTATTTCCCGCACGTACGATGCTACAACTCACTTTGAGACCACCTGTGAC
GATATTAAAAACATCTACAAGAGGATGACCGGCTCCGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAGAACGACATCTA
CGGGGAAGACTAG
GAATGTATCCTGTCAGGTATAATGTCGGTGAATGGGAAGAAAGTTCTTCACATGGATAGAAACCCATATTATGGAGGAGA
AAGTGCATCTATAACACCTCTGGAAGATTTATACAAAAGATTTAAGATACCAGGAGCACCACCAGCCTCGATGGGAAGAG
GGAGAGACTGGAACGTGGACCTGATCCCTAAGTTCCTCATGGCCAATGGTCAGCTTGTGAAGATGCTGCTTTATACAGAG
GTCACTCGTTATCTGGATTTCAAAGTGACTGAAGGGAGCTTTGTCTACAAGGGAGGAAAAATCTACAAGGTTCCTTCCAC
TGAAGCAGAAGCCCTGGCATCTAGCTTAATGGGACTGTTTGAAAAACGTCGCTTCAGAAAATTCCTAGTGTATGTTGCCA
ACTTTGATGAAAAAGATCCCAGAACTTTTGAGGGCATCGATCCTAAGAAGACTGCCATGCGAGAGGTGTACAAGAAATTT
GACTTGGGACAAGATGTCATAGACTTTACTGGCCATGCCCTGGCACTTTACAGGACCGATGACTATTTAGATCAGCCATG
TTGTGAAACCATTAATAGGATTAAACTTTACAGCGAGTCTCTGGCAAGATATGGCAAAAGCCCGTACCTCTACCCACTGT
ATGGCCTTGGGGAGCTGCCGCAGGGATTTGCAAGGCTAAGTGCTATTTATGGTGGCACCTACATGCTCAATAAACCCATT
GAAGAAATCATTGTGCAAAATGGCAAAGTGATTGGTGTGAAATCTGAAGGAGAGGTTGCTCGCTGCAAGCAGCTCATCTG
TGACCCCAGCTACGTCAAAGACCGGGTAGAGAAGGTGGGCCAGGTCATCAGGGTTATCTGCATTCTCAGCCACCCCATCA
AGAACACCAATGACGCCAACTCCTGCCAGATCATCATCCCCCAGAACCAGGTCAATCGGAAGTCAGACATCTACGTGTGC
ATGATTTCCTCTGCACACAATGTGGCCGCGCAAGGGAAGTACATCGCCATAGTGAGCACGACGGTGGAGACCAAGGAACC
TGAGAAGGAAATCAGACCAGCTTTGGAGCTTCTGGAACCAATTGAACAGAAATTTGTTAGCATCAGCGACCTCCTTGTAC
CCAAAGACCTGGGGACGGAAAGCCAGATCTTTATTTCCCGCACGTACGATGCTACAACTCACTTTGAGACCACCTGTGAC
GATATTAAAAACATCTACAAGAGGATGACCGGCTCCGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAGAACGACATCTA
CGGGGAAGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 98 .92 RPM |
| SRP017611_kidney | 219 .05 RPM |
| SRP017611_liver | 166 .49 RPM |
| SRP012049_cerebellum | 92 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005316 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017406 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020512 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013449 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003623 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021218 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005367 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006449 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011523 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_886 | 91.53 | 57.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_2196 | 96.70 | 84.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000005223 retrocopies