Parental gene: | PRKAR2A, ENSOCUG00000012426 |
| Aliases: | None |
| Description: | protein kinase, cAMP-dependent, regulatory, type II, alpha [Source:HGNC Symbol;Acc:9391] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 9:16417964..16490744(-) |
>ENSOCUG00000012426
ATGAGCCACATCCAGATCCCGCCGGGGCTCATGGAGCTGCTGCAGGGCTACACGGTGGAGGTGCTGCGGCAGCAGCCGCC
CGACCTCGTCGACTTCGCCGTGGACTACTTCACCCGCCTGCGCGAGGCCCGCGTCCAAGCCTTCGTCCCGTCCGCCGCCC
CTCCCTCAGCGGCGGCCGAGCCGGGGCCCAGCCCGGTCCCCGTCGCCGACGAGAACGCCGACAGCGACTCCGAGGAAGAC
GCCGACCTGGAAGTTCCGATTCCTAGCAGATTTAATAGACGAGTATCAGTCTGTGCCGAGGCCTATAACCCTGATGAGGA
GGAAGAAGATACTGACCCAAGGGTGATTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAATCTTGCAAAGATA
TTCTCCTTTTCAAAAATCTTGATCAGGAACAGCTTTCTCAAGTTCTTGATGCCATGTTTGAAAGGATAGTCAAAGTTGAT
GAACATGTCATTGATCAAGGAGATGATGGAGACAACTTTTATGTCATAGAAAGGGGAACCTATGACATTTTGGTTACAAG
AGATAATCAAACACGCTCTGTTGGTCAGTATGATAATCATGGCAGTTTTGGAGAGCTAGCTCTGATGTACAACACCCCAA
GAGCTGCTACCATTGTCGCTACTTCTGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGTGAAA
AACAATGCAAAAAAAAGGAAGATGTTTGAATCGTTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGGTATCGGAACG
AATGAAGATTGTGGATGTCATCGGAGAGAAGGTCTATAAGGATGGAGAACGCATAATCACTCAGGGTGAAAAGGCTGATA
GCTTTTACATCATAGAATCTGGGGAAGTGAGCATTTTGATTAAAAGCAAGACTAAATCAAACAAGGATGGTGGGAACCAG
GAAGTTGAGATTGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCTTGCACTGGTCACCAACAAACCCAGAGCTGCTTC
GGCTTATGCAGTTGGAGATGTCAAATGCTTAGTTATGGATGTGCAAGCATTTGAGAGGCTTCTAGGGCCCTGCATGGACA
TCATGAAGAGGAACATCTCACACTATGAGGAACAGCTGGTGAAGATATTTGGCTCCAGCATGGATCTAATCGACCCTGGG
CAGTAG
ATGAGCCACATCCAGATCCCGCCGGGGCTCATGGAGCTGCTGCAGGGCTACACGGTGGAGGTGCTGCGGCAGCAGCCGCC
CGACCTCGTCGACTTCGCCGTGGACTACTTCACCCGCCTGCGCGAGGCCCGCGTCCAAGCCTTCGTCCCGTCCGCCGCCC
CTCCCTCAGCGGCGGCCGAGCCGGGGCCCAGCCCGGTCCCCGTCGCCGACGAGAACGCCGACAGCGACTCCGAGGAAGAC
GCCGACCTGGAAGTTCCGATTCCTAGCAGATTTAATAGACGAGTATCAGTCTGTGCCGAGGCCTATAACCCTGATGAGGA
GGAAGAAGATACTGACCCAAGGGTGATTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAATCTTGCAAAGATA
TTCTCCTTTTCAAAAATCTTGATCAGGAACAGCTTTCTCAAGTTCTTGATGCCATGTTTGAAAGGATAGTCAAAGTTGAT
GAACATGTCATTGATCAAGGAGATGATGGAGACAACTTTTATGTCATAGAAAGGGGAACCTATGACATTTTGGTTACAAG
AGATAATCAAACACGCTCTGTTGGTCAGTATGATAATCATGGCAGTTTTGGAGAGCTAGCTCTGATGTACAACACCCCAA
GAGCTGCTACCATTGTCGCTACTTCTGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATCATAGTGAAA
AACAATGCAAAAAAAAGGAAGATGTTTGAATCGTTTATTGAGTCTGTGCCCCTCCTTAAATCACTAGAGGTATCGGAACG
AATGAAGATTGTGGATGTCATCGGAGAGAAGGTCTATAAGGATGGAGAACGCATAATCACTCAGGGTGAAAAGGCTGATA
GCTTTTACATCATAGAATCTGGGGAAGTGAGCATTTTGATTAAAAGCAAGACTAAATCAAACAAGGATGGTGGGAACCAG
GAAGTTGAGATTGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCTTGCACTGGTCACCAACAAACCCAGAGCTGCTTC
GGCTTATGCAGTTGGAGATGTCAAATGCTTAGTTATGGATGTGCAAGCATTTGAGAGGCTTCTAGGGCCCTGCATGGACA
TCATGAAGAGGAACATCTCACACTATGAGGAACAGCTGGTGAAGATATTTGGCTCCAGCATGGATCTAATCGACCCTGGG
CAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 67 .44 RPM |
| SRP017611_kidney | 121 .02 RPM |
| SRP017611_brain | 57 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003255 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013392 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012747 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006822 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_538 | 82.56 | 84.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000012426 retrocopies