Parental gene: | TMED5, ENSOCUG00000012427 |
| Aliases: | None |
| Description: | transmembrane emp24 protein transport domain containing 5 [Source:HGNC Symbol;Acc:24251] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:71366884..71388678(+) |
>ENSOCUG00000012427
ATGGACGAGAAGACTTGGCTGCCCGTCCCCGTGCTCCTCCTGGCCGCTCTGCCGCAAGTGCTGCTGCCGGGGGCGGCAGG
CTTCACTCCCTCCTTAGACAGTGACTTCACCTTTACCCTTCCGGCCGGCCAGAAGGAGTGTTTCTACCAGCCCATGCCCC
TGAAGGCCTCGCTGGAGATCGAGTACCAGGTTTTAGATGGAGCAGGGTTAGATATTGATTTTCATCTTGCCTCTCCAGAA
GGCAAAACCTTAGTTTTTGAACAAAGAAAATCAGATGGCGTTCACACTGTAGAGACTGAAGATGGCGACTACATGTTCTG
CTTTGACAATACATTTAGCACTATTTCTGAGAAGGTGATTTTCTTTGAATTAATCCTTGATAATATGGGAGAGCAGGCAC
AAGAACAAGAAGATTGGAAGAAATATATTACCGGCACAGATATGCTAGACATGAAACTGGAAGATATCCTGGAATCAATT
AACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCATATCCAAACTCTGCTGAGAGCATTTGAAGCTCGTGATCGAAACAT
ACAAGAAAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGTTAATTTGGTGGTGATGGTGGTGGTGTCAGCCATTCAAG
TTTATATGCTGAAGAGCTTATTTGATGATAAGAGGAAAAGTAGAACTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 10 .98 RPM |
| SRP017611_kidney | 19 .06 RPM |
| SRP017611_liver | 19 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000012192 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003453 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000073 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028196 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_566 | 80.98 | 70.74 | Please wait, loading  |
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Download FASTA sequences of all ENSOCUG00000012427 retrocopies