Parental gene: | CERS5, ENSOCUG00000012843 |
| Aliases: | None |
| Description: | ceramide synthase 5 [Source:HGNC Symbol;Acc:23749] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 4:34282309..34316869(-) |
>ENSOCUG00000012843
GAGCAGCGCTTTCTGCTGCCCAAGAACATGAGCTGGGCGACTGAGGGGGCGGGCGACGGCGACGGCTACCCGCGCGCCCG
GCACATCCTGTCGGTGTTCCCGCTAGCGGCGGGCGTCTTCTCCTTGAGGTTGCTCTTCGAGCGATTTATTGCTAAACCCT
GTGCACTCCATGTTGGCATCGAGGACAGTGGACCTTATCAGGCCCAACCCAATGCCATCCTTGAAAAGGTGTTCGTATCT
ATCACCAAGTATCCTGATGAGCAGAGGCTGGAGGGCCTGTCAAAGCAACTGGACTGGGATGTCCGAAAAATCCAATGCTG
GTTTCGCCATCGGAGGAATCAGAACAAGCCCCCAACGCTCACTAAATTCTGTGAAAGCATGTGGCGATTCACTTTTTATT
TATGTATATTCTGCTACGGAATTAGATTTCTCTGGTCGTCCCCTTGGTTCTGGGACACCCGACAGTGCTGGCACAGCTAT
CCATATCAGCCTCTTTCAAGTGGACTTTACTACTATTATGTCATGGAATTGGCCTTCTACTGGTCTCTCATGTTTTCTCA
ATTTATAGACATTAAAAGAAAGGACTTCCTGATTATGTTTGTGCATCACTTGGCCACCATCGGGCTGATCACCTTCTCTT
ACATCAACAACATGGTCCGGGTGGGGACTCTGGTCATGTGTCTTCATGATGCCTCAGACTTCCTGCTGGAGGCGGCCAAG
CTAGCAAATTATGCCAAGTATCAGAGGCTCTGTGACACCCTTTTTGTGATCTTCAGTGCTGTGTTCGTGGTCACTCGTCT
AGGAATCTATCCATTCTGGATTCTGAACACGACCCTCTTTGAGAGTTGGGAGATGATCGGGCCCTATCCTTCCTGGTGGC
TCTTCAATGGCCTTCTCCTGATCCTACAGGTCCTACATGTCATCTGGTCCTACCTTATTGCACGAATTGCTTTCAAAGCC
TTGATCCGAGGAAAGGTGTCCAAGGATGACCGCAGCGACGTGGAGAGCAGCTCAGAGGAAGAAGACGTGGCGGCCTACAC
AAAGGGCCCGCAGGGCAGCTGCCCCAGCAACGGGGCCAGCTGTGTGAACGGCCACATGGGAGGCAGCCACTGGGCTGAAG
AG
GAGCAGCGCTTTCTGCTGCCCAAGAACATGAGCTGGGCGACTGAGGGGGCGGGCGACGGCGACGGCTACCCGCGCGCCCG
GCACATCCTGTCGGTGTTCCCGCTAGCGGCGGGCGTCTTCTCCTTGAGGTTGCTCTTCGAGCGATTTATTGCTAAACCCT
GTGCACTCCATGTTGGCATCGAGGACAGTGGACCTTATCAGGCCCAACCCAATGCCATCCTTGAAAAGGTGTTCGTATCT
ATCACCAAGTATCCTGATGAGCAGAGGCTGGAGGGCCTGTCAAAGCAACTGGACTGGGATGTCCGAAAAATCCAATGCTG
GTTTCGCCATCGGAGGAATCAGAACAAGCCCCCAACGCTCACTAAATTCTGTGAAAGCATGTGGCGATTCACTTTTTATT
TATGTATATTCTGCTACGGAATTAGATTTCTCTGGTCGTCCCCTTGGTTCTGGGACACCCGACAGTGCTGGCACAGCTAT
CCATATCAGCCTCTTTCAAGTGGACTTTACTACTATTATGTCATGGAATTGGCCTTCTACTGGTCTCTCATGTTTTCTCA
ATTTATAGACATTAAAAGAAAGGACTTCCTGATTATGTTTGTGCATCACTTGGCCACCATCGGGCTGATCACCTTCTCTT
ACATCAACAACATGGTCCGGGTGGGGACTCTGGTCATGTGTCTTCATGATGCCTCAGACTTCCTGCTGGAGGCGGCCAAG
CTAGCAAATTATGCCAAGTATCAGAGGCTCTGTGACACCCTTTTTGTGATCTTCAGTGCTGTGTTCGTGGTCACTCGTCT
AGGAATCTATCCATTCTGGATTCTGAACACGACCCTCTTTGAGAGTTGGGAGATGATCGGGCCCTATCCTTCCTGGTGGC
TCTTCAATGGCCTTCTCCTGATCCTACAGGTCCTACATGTCATCTGGTCCTACCTTATTGCACGAATTGCTTTCAAAGCC
TTGATCCGAGGAAAGGTGTCCAAGGATGACCGCAGCGACGTGGAGAGCAGCTCAGAGGAAGAAGACGTGGCGGCCTACAC
AAAGGGCCCGCAGGGCAGCTGCCCCAGCAACGGGGCCAGCTGTGTGAACGGCCACATGGGAGGCAGCCACTGGGCTGAAG
AG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .56 RPM |
| SRP017611_kidney | 24 .73 RPM |
| SRP017611_brain | 52 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000004668 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006713 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000024932 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1643 | 66.34 | 54.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000012843 retrocopies